Amborella trichopoda: 18442559
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Entry
18442559 CDS
T02990
Name
(RefSeq) heparanase-like protein 3 isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
atr
Amborella trichopoda
Pathway
atr00531
Glycosaminoglycan degradation
atr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
18442559
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
atr00536
]
18442559
Enzymes [BR:
atr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
18442559
Glycosaminoglycan binding proteins [BR:
atr00536
]
Heparan sulfate / Heparin
Enzymes
18442559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
18442559
NCBI-ProteinID:
XP_006852836
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MGFLSLNMGFLLCFLVFVSGFLNVHCGNGNSSVVEGEVLINGSSVIAETDGSFICATMDW
WPPEKCDYGTCSWDHASLLNLDLNNTILHNAVKAFSPLKIRLGGTLQDKVVYEMRGVPCT
PSSFVKNASEMFGFTQGCLPIKRWDELNYFFKKSGARVYFGLNALNGRVPLPDGSLGGPW
NSTNAVGLIRYTVNRGYTAIRGWELGNELSGRGIGASINADQYAADVISLHTIVQDIYKG
FKSKPLVAAPGGFFDASWFGELVAKTEPNFLDVITHHIYNLGPGVDDHLVEKILDPSYLD
GEANTFRSLQSLLHSSNTSTKAWVGEAGGAYNSGHNLVTNAFVFSFWYLDQLGMASNFNT
KTYCRQSLIGGNYGLLNTTTYEPNPDYYSALLWHRLMGTRVLSTNFTAKSKIRAYAHCAK
RTKGITLLLINLDGNTTVNARVTMDSAIINSSKHQNMFPHTNFNRMPRKQRATEIIREEY
HLTAKDGDLHSQTMLLNGKILGVNQQGKIPRMEPIRVNSSEPIVVAPFSIVFVHMPLIHA
PVCG
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggatttctctcactgaacatgggattcttgctgtgctttctggtatttgtttcggga
tttttgaatgtgcattgtgggaatgggaattcatctgttgtcgagggtgaagtccttata
aatggaagctctgttattgctgagactgatggaagttttatctgcgctacaatggactgg
tggcctccagagaaatgtgattatgggacctgtagctgggaccatgcttctctgctcaat
ctggatctcaacaataccatcctgcacaatgctgtaaaagctttttctcctctgaaaatt
cgactggggggaacactgcaagataaagtcgtatatgaaatgagaggagtgccctgtact
cctagttcttttgtgaagaatgcttcagagatgtttggttttactcagggctgcttgcct
atcaaaagatgggacgagcttaattatttcttcaagaaatcaggagccagggtttatttt
ggactgaatgcgctcaatggcagagtgccattaccggacggttcgctaggaggaccatgg
aattcaacaaatgctgttgggctcattcgctacactgtcaatcgtggttacacagccatc
cggggatgggagctcggaaatgaacttagtggaagggggattggagctagtattaatgca
gatcaatatgcagcagatgtgatatcattacatacaattgtgcaagatatctacaaaggt
ttcaaatccaagccattagtagcagcaccagggggcttctttgatgccagctggtttggt
gaacttgttgctaaaacagaacccaattttctagatgtcatcactcaccatatatacaat
cttggtccaggtgtggatgatcatttagtggagaagattctcgatccttcctaccttgat
ggagaggccaacacgttccgtagtctacagagtttgctacacagctctaacacaagcacc
aaggcatgggttggagaagctgggggggcttacaacagtgggcacaatctcgtcacaaat
gcttttgttttcagcttctggtacttggatcagcttggaatggcttcgaatttcaacacc
aagacttactgtaggcagagcttgattggtggaaactatggcctcctcaatacaaccact
tatgaaccaaaccctgactattacagtgcgcttctttggcaccgactgatgggaacaaga
gtcctctcaacgaatttcacggcgaaaagcaaaattcgggcatatgcacactgtgcaaaa
agaacaaaggggatcaccctactcttgattaacctcgacggcaacactacagtgaatgcc
cgtgtcactatggactctgccattattaatagctccaaacatcaaaacatgttccctcat
acaaacttcaataggatgccgcgaaagcaaagagcaactgaaataataagggaggagtat
catctcactgcaaaggatggagacctacatagccaaaccatgcttctcaatggaaaaata
ctaggtgtaaaccaacaaggtaagatacctcgtatggaaccaataagagtaaattcctca
gaacccatagttgttgctccgttttccattgtgtttgtgcacatgcctcttatacatgcc
cctgtttgtgggtga
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