Amborella trichopoda: 18442680
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Entry
18442680 CDS
T02990
Name
(RefSeq) SNW/SKI-interacting protein
KO
K06063
SNW domain-containing protein 1
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18442680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18442680
Spliceosome [BR:
atr03041
]
Complex B
Other components
Prp19-related factors
18442680
Complex C
18442680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
18442680
NCBI-ProteinID:
XP_006852956
UniProt:
U5D237
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MATLKELLPHPKSTTTGVYDFSSDPWFKDRFIDPAKSSINSASKAKPIPPYGKRAGFVPR
KPEDFGDGGAFPEIHIAQYPLGMGRKEEKRDSKILPLTVDAHGNVAFDAIVKQNENASKI
VYSQHKDLLPKLMNDEEKKDEEEEEEIANTTQRTKEALEKIVNVRLSAAQPKNVPQQSTD
ATFIKYKPSQQSAAFNSGAKERIIRMVDMPVDPLEPPKFKHKRVPKALGSPPVPVMHSPP
RPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALYVA
EQKAREAVEMRSKIQRELMLKEKNRKEQELRALAQKARSERTGAGPVVAASDKGAIDGAE
EVTPSFNGGERRGDFDRVKENIRETKEGREERLKREAIREERRRERERERRLEAKEVAMG
KKSKITRDRDRDISEKVALGMATTGRSGEVMYDQRLFNQEKGMESGFATDDQYNIYDKGL
FTAQSTLSTLYRPKKDADSDMYGGADEQLEKVLKTDRFRPDRGFEGASEKTGPRDRPVEF
EKEAEEADPFGLDQFLTEVKKGKKAMDKIGGGGTMKASAGAAMRESYEGGSSRTRVDFER
GR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccttgaaggaacttcttccccatccaaagtcgacaaccactggtgtctatgac
ttctcatcagacccatggttcaaagatcgcttcattgaccctgcaaaatccagtattaat
tcagcttccaaagccaaacccatccctccttatgggaaacgagctggttttgttcctcga
aaacctgaagattttggagatggtggggcctttcctgagatccacatcgcccagtatcca
cttggtatgggccgaaaagaagagaagagagactcaaaaatccttcccctcactgtagat
gcacatggtaatgttgcgtttgatgccatagtcaaacaaaatgagaatgcatccaagatt
gtctattcgcaacacaaagacttgctcccaaagttgatgaatgatgaggaaaagaaggat
gaagaagaagaagaagaaatagcaaatacaacacagagaacaaaggaagctttggagaag
atagtgaatgttcgtttgagtgctgcccaaccaaagaatgttccccaacaatccaccgat
gccacgttcatcaaatataaaccgtcacaacaatcagctgcattcaattcaggtgcaaaa
gagaggattattcgaatggtcgacatgcctgttgacccactcgagcccccaaaattcaag
cacaagagggtgcctaaagccttgggttcgccccctgttcctgttatgcattcaccacct
cgtcctgttacagtgaaagaccaacaagactggaaaatcccaccatgtatctctaattgg
aagaacccaaaagggtacacgatccctttagacaagcgtcttgctgctgatgggcgaggg
ctccaagaggttcagatcaatgataactttgcaaaactctcagaggccttgtatgttgca
gagcaaaaggctcgagaagctgtagagatgaggtctaagatacaaagggagctcatgctc
aaagagaagaataggaaggagcaagagttacgtgctcttgctcaaaaagcaaggtcagag
aggactggggcagggcctgtagttgccgcctcagataaaggtgcgatcgatggggccgag
gaggtcaccccatcttttaatggaggtgagagaaggggagatttcgatagggtaaaagaa
aatattagagagacaaaggaggggagagaagagaggctgaagcgggaagcgattcgtgag
gaaagaaggcgggagagagagagggagaggagattggaggcaaaggaagtagccatgggt
aagaagagcaagataacgagggatagggatagggatattagtgagaaggttgctcttggt
atggccactactggcaggtcgggtgaagtcatgtatgaccaaaggcttttcaaccaagag
aagggtatggagtctgggtttgcaaccgatgaccaatacaacatatatgataagggtttg
ttcactgctcaatctacgctctctactctctataggcccaagaaagatgctgattctgat
atgtatggaggagcggatgagcagcttgaaaaggttttgaagactgatcgattcaggcct
gacagagggtttgaaggggctagcgagaagacggggcctagagataggcctgttgagttt
gagaaagaagcagaagaggctgatccttttggtttggatcagttcttgacagaggtgaag
aaagggaagaaggctatggacaaaatcgggggtggcggtaccatgaaggccagtgctggt
gctgcaatgagggaaagctacgagggggggtcgagcaggacacgtgtcgactttgaaaga
ggacggtga
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integrated database retrieval system