Amborella trichopoda: 18442888
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Entry
18442888 CDS
T02990
Name
(RefSeq) cryptochrome-1
KO
K12118
cryptochrome 1
Organism
atr
Amborella trichopoda
Pathway
atr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
18442888
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
18442888
NCBI-ProteinID:
XP_011626561
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
IGTWVLSGDTSRCRSDTLTFEDESEKGSNALLARAWSPGWSNADKALTNFINGPLIEYSI
NRKKADSATTSLLSPHLHFGEVSVRKVFHLVRIKQVFWANEGNTAGEESINLFLKSIGLR
EYSRYLTFNHRSSHERPLLGHLKFFPWVVDESYFKAWRQGRTGYPLVDAGMRELWATGWL
HDRIRVVVASFFVKVLQLPWTWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDHID
NPQIEGYKFDPQGEYVRRWLPELARLPTEWIHHPWDAPHSVLQAAGVELGTNYPLPIIEI
SAAKERLQEALSEMWQLEANSRAAMENGTEEGLGDSSESPPLDFPQEEMEVDNQPARPTG
QIGATRRLADQMVPSMTVSSFRVEEEEEPSSNTGSSRDNRPEVPSNASFGSEADRRDEVL
NLGNMGELERERNASEFNVSVSLQNAVHFTAESSSSLRERDGGVVPVWSPSTSSRSEQLI
GEESGLGNGGSYLQRHAQSHQLMTWRQISRTRSRNWEVDNAVQPNAIG
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
attggcacatgggttctttcaggtgatacctcaaggtgtcgttctgacaccctgacattt
gaggatgaatctgagaagggaagcaatgctctacttgccagggcatggtcgcctggatgg
agcaatgcagataaagctttaaccaactttattaatggcccattaatagagtattcaata
aaccgaaaaaaggcggacagtgctaccacatctcttctctctcctcacttacactttggg
gaagtgagtgtgcgcaaagttttccatcttgttcgcatcaagcaagtcttctgggcaaat
gaaggaaatacagctggtgaagagagtatcaacctctttcttaagtccataggccttcga
gaatactctcgatatttaaccttcaatcaccgtagcagccatgaaaggcctcttcttggg
cacctcaagttcttcccttgggtggtcgatgagagttactttaaagcttggaggcaaggt
aggactggttatcctttggttgatgcgggaatgagagagctatgggctactggttggctt
catgatcggatacgtgttgtggtggcaagttttttcgtgaaggtccttcaacttccatgg
acgtggggtatgaagtacttttgggacacactattggatgccgatttggaaagtgatgct
ctgggatggcagtatatttcagggactcttcccgatagtcgagagtttgatcatatcgat
aacccacagattgaaggttataaattcgatccacaaggagaatatgttcgtaggtggctt
cctgagcttgctcgcctccccaccgaatggatacatcatccatgggatgccccccactct
gtactccaagctgccggtgttgaacttgggacaaattatccactacctattattgaaatc
tcagcagctaaagaaaggttacaagaagctctctcagagatgtggcaattggaagccaac
tctagagcagcaatggagaatgggacagaagaaggattaggagactcatcagaatcccca
cctcttgattttcctcaagaagaaatggaagtcgataaccaaccagctagacccactggt
caaattggtgcaacgaggagattggctgaccaaatggtcccgtccatgactgtatcatca
tttagagttgaagaagaggaagagccatcgagtaatacaggttcttcaagggataacagg
ccagaagtgccatcaaatgcaagttttggtagtgaagcggatcgaagagatgaggtgttg
aatcttgggaatatgggtgaattggaaagagaaaggaacgcatcagagttcaatgtgagt
gtttcattgcaaaatgctgtacattttacggctgaatcgtcaagtagtctgagagagaga
gatggtggggtggttcccgtttggtctccatcgacatctagtcggtcagagcaacttatt
ggggaagaaagtggccttgggaatggtggatcctatttgcagaggcacgcacagtctcac
cagctgatgacttggagacaaatttctcgaacaaggtcaagaaactgggaggtagacaat
gctgtacagcctaatgccattggctag
DBGET
integrated database retrieval system