Amborella trichopoda: 18442901
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Entry
18442901 CDS
T02990
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
atr
Amborella trichopoda
Pathway
atr03020
RNA polymerase
atr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
18442901
09124 Replication and repair
03420 Nucleotide excision repair
18442901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18442901
03400 DNA repair and recombination proteins [BR:
atr03400
]
18442901
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
18442901
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
18442901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
18442901
NCBI-ProteinID:
XP_006853170
UniProt:
U5CZT5
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MEGVSYQRFPKVKIREMKDDYLKFELRETDPSMANALRRIMLAEVPTIAIDLVEIEANSS
VLNDEFLAHRLGLIPLTSEKAMSMRFSRDCDACDGDGQCEYCSVEFQLSVKCDSDQTLDV
TSADLVSSDIHVIPVDVAGRGMDSNGFDASEQRGIIIVKLRRGQELRLRAIARKGIGKDH
AKWSPGATVTFMYEPEIHINDDLMETLSLDEKREWVESSPTRVFDIDPNTHQVVVVDPEA
YTYDDEVIKKAEAMGKPGLVEIYAREDSFIFTVESTGAIKASQLVINAIEVLKQKLDAVR
LSLDTEEGDEQFGELGAHMRGGGI
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgtgtcgtaccagaggttcccaaaggtgaagatcagagagatgaaggacgac
tacctgaaattcgagctcagagagacggaccccagcatggccaacgccctccggcgcatt
atgcttgcagaggttcccaccatagccattgacctggtggagatcgaagccaactcatct
gtccttaacgatgagtttcttgcccatcgccttgggctcattcccctcaccagtgagaaa
gccatgtccatgaggttttctcgagactgtgatgcctgtgatggagatggccagtgcgag
tactgttctgtggaattccaattgagcgtgaagtgtgattctgatcaaaccctagatgtt
accagcgccgaccttgtaagttctgacatccatgtgatacctgttgatgtggctggtcga
ggcatggactccaatggatttgacgcttctgagcaaaggggtattataattgtcaagctg
cgccgtgggcaagaattgaggcttagagctatagctagaaagggtattggtaaagaccat
gcgaaatggtcaccaggtgcaacagtaacttttatgtacgaaccagagattcacatcaat
gacgatttaatggaaacattatcacttgacgagaaaagagaatgggttgaaagtagccca
accagagtctttgacattgatccaaatacccaccaggtagtcgtggtggatcctgaagca
tacacttatgatgatgaagtgatcaagaaagcagaagcgatgggaaagccagggctcgtg
gagatttatgcgagggaagacagcttcatcttcaccgtcgaatccacgggtgcaatcaaa
gcctctcaattagtgatcaatgcaattgaagtcttgaagcagaaattggatgctgtccgt
ctttctctggacactgaagaaggtgatgaacagtttggcgaactaggtgcacacatgcga
ggtggagggatatga
DBGET
integrated database retrieval system
