Amborella trichopoda: 18443041
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Entry
18443041 CDS
T02990
Name
(RefSeq) LOW QUALITY PROTEIN: protein RAE1
KO
K14298
mRNA export factor
Organism
atr
Amborella trichopoda
Pathway
atr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18443041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18443041
03036 Chromosome and associated proteins [BR:
atr03036
]
18443041
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18443041
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
18443041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_SPT8
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
WD40_RFWD3
GH18_BT1044-like
Motif
Other DBs
NCBI-GeneID:
18443041
NCBI-ProteinID:
XP_020528380
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MSALGINTGSSSNPSNPNKSVEVVQAPTDGVSSLSFSPKGNYLVATSWDNQVRCWEILQT
GGSVPKASITHDQPVCLVFTMDEDYSCYILCSTWKDVGTTVFSAGCDKQVKMWPLKSGGQ
PTTVAMHDAPIKQVEWIPEMSLLVTGSLDKTVKYWDTRQPNPVHTQQLPERCYSMSVRHP
LMVVGTADRNLIVYNLQNPHTEFKRITSPLKYPSRCLAAFPDKQGFLVGSIEGRVGVHHL
EDSQQSXNFTFKCHREGNEIYSVNSLNFHPIHQTFATAGSDGAFNFWDKDSKQRLKAMAR
CNQPIPCSTFNNDGSIFAYAVCYDWSKGAENHNPATAKTNIFLHIPQESEVKGRPRVSSG
RK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctctggggataaacactggttcgagctcaaatccaagtaacccaaataaatca
gtggaggtggtgcaggcccccactgatggggtttctagcctcagtttcagtccaaaaggc
aattatcttgtggccacttcttgggataatcaggttaggtgctgggagatactccaaacc
ggaggcagtgtaccgaaggcttcaataactcatgatcagccggtgtgtttggtgtttacg
atggatgaagattattcttgttacattttgtgctcaacctggaaagacgttggaacaaca
gtattttcagctggttgtgacaagcaagttaaaatgtggcctttgaagtctggtgggcaa
ccaacaacagtggccatgcacgacgcgccaattaagcaagtggaatggattcctgagatg
agtttacttgtaactgggagcttggacaagactgtgaagtattgggatactaggcagcca
aaccctgtgcacactcaacagctgcctgagcgctgttattccatgagtgtgcgacatcct
ctgatggtcgtgggaactgctgatcgtaatctgatcgtttacaatttgcaaaatcctcat
acagagtttaagaggatcacttcaccactaaagtacccaagtagatgtcttgcggcattc
cctgacaagcaaggttttttggtgggttcaatagagggccgagtcggcgtgcaccatctg
gaagattcacagcagagttaaaacttcactttcaaatgccacagggaaggcaatgagatc
tattcagtcaactctttaaacttccatcctatacatcaaacttttgccacagctggatct
gatggtgctttcaacttttgggacaaggatagcaaacaaagactcaaggctatggcaaga
tgcaatcagccgattccctgcagcacattcaacaatgatggttcaatatttgcatatgct
gtgtgttatgactggagtaagggagcagaaaatcataaccctgcaacagctaaaaccaac
attttcctccatattccacaggaatcagaggtcaaaggaaggccacgagtctcaagtgga
aggaagtga
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integrated database retrieval system
