Amborella trichopoda: 18443117
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Entry
18443117 CDS
T02990
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
atr
Amborella trichopoda
Pathway
atr00906
Carotenoid biosynthesis
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
Module
atr_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
18443117
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
atr01006
]
18443117
Enzymes [BR:
atr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
18443117
Prenyltransferases [BR:
atr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
18443117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HTH_25
Motif
Other DBs
NCBI-GeneID:
18443117
NCBI-ProteinID:
XP_006853378
UniProt:
U5CXY5
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MSGAVMWVISPTDNGRSMVKLKGISGKRIRRNVSKMKHLNGFQVFSSMVAHTPSGAVFTR
SEQKVYDVVLKQAALVREKRISDLVFDVKPGKAMPASLDLLNGAYDRCGEVCAEYAKTFY
LGTLLMTPQRQRAIWAIYVWCRRTDELVDGPNASHITPTALDRWERRLNDLFRGRPYDMF
DAALSDTVSKFPVDIQPFKDMIEGMRMDLRTSRYKNFDELYLYCYYVAGTVGLMSVPVMG
IAADSNTSTESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELGRAGLSDDDIFA
GKVTEKWRNFMKEQIKRARMFFDEAEKGVVDLNPASRWPVWASLLIYRQILDAIEDNDYN
NFTKRAYVRKLKKIASLPVAYGKTLMRKPRTRSI
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgcggttatgtgggtgatttctcccacagataatgggagatcaatggtgaaa
ttgaagggaatttcaggaaaaagaatcaggagaaatgtctcaaaaatgaaacacttaaat
gggtttcaggttttttcgagtatggttgcccacacaccaagtggtgcagttttcacacga
tcagaacagaaggtgtatgatgtggttttgaagcaagctgctctagtgagagaaaagagg
atctctgatctagttttcgatgtgaaaccaggcaaggccatgcctgcttccttggacctc
ctcaatggcgcttatgatcggtgcggcgaggtttgtgcagagtatgccaagactttttac
ttggggacgctgcttatgaccccgcaaagacaaagggctatatgggctatttatgtatgg
tgtaggaggacagatgaacttgtggacggcccaaatgcttcgcacattacaccaacggct
ctggatcgatgggagagaagattaaatgatctctttcgaggccggccctacgatatgttt
gatgcagctctttcagatacagtctccaagttcccagtggatatccagccattcaaagac
atgatagaaggcatgagaatggacttgaggacgtcaagatacaagaactttgatgagctc
tacctctactgttattacgttgccggaacggtcgggttgatgagcgttccggttatggga
attgcagcggattccaatacatcaacggagagtgtctataatgccgcattggccttggga
atagccaatcagctcaccaacatactgagagacgtaggagaagatgctagaagaggaaga
atatacctcccacaagatgagttgggacgtgcggggctatcagatgatgacatttttgcc
ggaaaagtgacagagaagtggagaaatttcatgaaggagcaaataaagagggcaaggatg
ttctttgatgaagctgagaagggagtggtggatctaaatcctgcaagtagatggccggtt
tgggcctctttgttgatatatcgtcaaatattagatgcaattgaagataatgactacaac
aatttcactaagcgtgcatatgttcggaaattgaagaagattgcttcattgccggttgct
tatggtaaaactctcatgagaaagccgaggactcgtagcatatag
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