Amborella trichopoda: 18443148
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Entry
18443148 CDS
T02990
Name
(RefSeq) peroxisome biogenesis protein 1
KO
K13338
peroxin-1
Organism
atr
Amborella trichopoda
Pathway
atr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
18443148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18443148
Membrane trafficking [BR:
atr04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
18443148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
AAA_5
NACHT
NPHP3_N
RuvB_N
AAA_22
AAA_14
IstB_IS21
nSTAND3
RNA_helicase
AAA_18
Bac_DnaA
AAA_19
AAA_11
AAA_7
AAA_33
Mg_chelatase
TIP49
AAA_2
ResIII
ATPase_2
SLFN-g3_helicase
PhoH
ATPase
Sigma54_activat
NB-ARC
DEAD
AAA_lid_PRS2_C
PEX-2N
CDC48_2
Motif
Other DBs
NCBI-GeneID:
18443148
NCBI-ProteinID:
XP_006853404
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MEVEVRSVGGMESCFVALPLALIHSLQSTCPGFLPPVLALELQSVTDSKEPWHLAWSGAA
SRSHAIEVAKQLAECIGMPNRTKVQVRAAANLPKATFAMIEPISEDDWEVMELNSEFAEE
TILKQVGIVHEGMKFPLWLHGHTVATFVVVSTTPKKPVVQLVPETEVAVAPKRRKNVGGA
QQGVGYVKEHITTKALLRVQELNRNYVHTYKQEGVKLGVVLTSVVFLHPETARHFMFDNG
QLVSISSRASGNGSLQNQKWGASRKKANLTTAEKNNGWLRSGTMVPRHATVCISLSDSVA
RGHVMLQRSLRLYIKADLHTWVHVWRCSSHVKKDASLILSPCHFKLETDKLLEDNANLFE
FRNSLKTNSMHQNIDSIFNEEVMDWSTHEEFIEALPSGCHGHGENEHDCETCAVKQKERL
VQIWTMGQLNIMATLNGVDDVKSLVLGRETILHFEVDMGLTFGSCKTGSKGTINMSDKSP
LELLFLLTVTSDESDLGEQYESYELAFSTVNSSSEKHGGLELQFEKLDFGGPVCFDCPNE
KCFGRSFSSSVSSLSWMAVALTDIINRLTVLLSPSSGKLFSNLDLPLPGHVLVHGPPGSG
KTLLAMAVAKHLEGSKDILAHIVFINCSKLALENVNTIRETLNGYISEALDHPPALVIFD
DLDALISSSESDGSQSSHSVMSLAEFLGDIMDEYQETMKTSCGIGPVAFMASLQSPGTLP
QTLRSSGRFDFHVQMPVFAAPERGALLKRELQKRSLLCSKEVISEIASKCDGYNAYDLEI
LVDRAVHAAVGRFSSTSAVLGHRKPALTREDFSHAIRDFLPVAMRGVTKSGSEGGRSGWE
DIGGLHDIRNSIQEMVELPSKFPDIFANAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL
RFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV
VNQLLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDHLLFCDFPSREERLDILKVL
SRKLPLASDVDLSATASVTDGFSGADLQALLSDAQLESVHQFLDSGSNGQPGTTPVISDS
LLKSVASRVRPSISETEKQRLYGIYSQFLDSRKSVAAQTRDAKGKRSTLA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgaggtgagaagtgttgggggaatggagagctgctttgtggctctccctctt
gccctaatccattctttgcagtccacatgtcctggttttttaccacctgttcttgctctc
gagcttcaatcagtcactgatagcaaagagccatggcacttagcctggtctggcgctgct
tctcgctcccatgcaattgaggtagcaaaacaactggcagaatgcattggtatgcctaac
cgtacaaaagttcaagtaagggcagctgcaaatttaccgaaagctacatttgctatgata
gaaccaatcagtgaggatgattgggaagttatggagcttaattcggaatttgctgaggaa
actatcttgaaacaggttggtattgtccatgaagggatgaaatttcctttgtggttgcat
ggccatacagttgccacatttgtcgtagtttcaactactcctaagaaaccggtagtgcaa
cttgtgccagaaactgaagttgcagttgccccgaagagaagaaagaatgttggaggcgca
caacaaggtgttgggtatgtgaaagagcatatcacgactaaggcactcttacgtgttcaa
gagctaaacaggaactatgttcacacatacaaacaagagggtgtaaagcttggtgtggtt
ctcacttctgttgtttttttacatcccgaaactgcgaggcactttatgtttgataatggt
caactagttagcatatcatctagagcatctgggaatggcagcctgcagaatcagaaatgg
ggcgcctcaagaaagaaggccaatttgactactgcagagaagaataatgggtggttgaga
agtggcacaatggttcctaggcacgcaactgtttgcatttctctttcagattcagtggca
agagggcatgtcatgcttcaacggtctctccgtctttatataaaagcagacttgcacaca
tgggttcatgtatggagatgcagctcccatgttaaaaaagatgcttctttaatcctttct
ccttgtcattttaagcttgagacagataaattgcttgaagataatgctaatctctttgag
tttcgcaactctctcaagactaacagcatgcaccaaaatattgattcaatattcaatgag
gaagttatggattggtcaactcatgaagagttcatcgaggcacttccttccgggtgtcat
ggacatggggagaatgagcatgactgtgaaacctgtgctgtaaaacaaaaagaaaggctc
gtccagatttggacaatggggcaacttaatataatggcaacactgaatggtgtagatgat
gtgaagtctttggttctgggaagggaaacaattttgcactttgaggtggatatgggtttg
acctttggaagctgtaaaactggatctaaaggaacgataaatatgtctgataagtctcct
ttagaactgctgtttttgttaactgtaacgtctgacgagtctgatcttggtgaacagtat
gaatcttatgagcttgccttctcaactgtaaattcaagtagtgaaaaacatggtggctta
gagttgcagtttgagaagctcgattttggtggtcctgtttgttttgattgtcctaatgag
aagtgttttggtcgaagctttagttcaagtgtttcatctttgagctggatggcagtggct
ttgaccgatattattaaccggttgacagtgctattatctccaagttctggaaagttattt
agtaacctggatcttcctctccctggccatgttcttgtgcatggacctcctggttcgggg
aaaaccttattagctatggctgttgctaaacacctagaaggcagcaaagatattctagct
cacatagtcttcataaattgctcaaaacttgctttagagaatgttaatacaatacgggaa
acccttaatggctacatatctgaagctcttgatcatccaccagcacttgtcatatttgat
gatctggatgctcttatttcatcttctgaatctgatggctctcaatcttctcattctgtt
atgtctcttgcggaatttcttggagatataatggatgagtatcaggaaacgatgaagaca
tcttgtggtattggccctgttgcatttatggcttctctgcagtcaccagggactttgccc
cagactttgcgctcttcaggaagatttgatttccatgttcaaatgccagtgtttgcggcc
ccggagcgtggtgctttgttgaaacgtgaattgcagaagcgttctttgctttgttccaaa
gaagtcatatctgaaattgcctcaaagtgtgatggatataatgcatatgacctggaaata
ttggttgatagggctgtccatgctgctgttggtcgcttttcatctacttctgcagtttta
gggcacagaaagccagctttaacgagggaagatttttcccatgcaattagagatttcctt
ccagtagccatgcgcggcgtcacaaaatctggatctgaaggtggccgttctgggtgggag
gatattggggggcttcatgatatccgcaactccatccaggagatggttgagttgccctct
aagttcccggacatttttgccaatgcgccactgagattaagatctaatgttcttctgtac
ggcccccctggttgtggtaaaactcacattgttggagctgctgcagctgcttgttcttta
cgatttatctcagtaaaaggacctgagctgttgaacaagtatattggtgcatcagagcaa
gctgtacgggatatattctcgaaagctgccgctgcagcaccgtgcctgctgttttttgac
gagttcgattctattgcaccaaagaggggtcatgacaatactggcgtaacagatcgagtt
gttaatcagctattaactgaacttgatggtgtcgaggtcctgactggggtatttgtattt
gctgccactagtcgccctgatctacttgatgctgcacttttacgacctggaagactcgac
caccttctcttttgcgactttccatctagggaggaaagattggatatccttaaggtcctc
tccagaaagcttcctttggcaagtgatgtcgatctgagtgccacagcctcagttaccgat
ggtttcagtggtgcagatctccaggcccttctctctgatgcccagcttgaatcagtgcat
cagtttcttgatagtgggagcaatggtcagcctggaaccacccccgtcatatctgattct
cttttgaaatcagtagcttctcgtgtgagaccttctatatcagaaaccgagaagcagaga
ctttatggcatctacagtcagtttttggattcaaggaaatctgttgccgcgcagacaagg
gatgcaaagggcaaacgatcaactttagcttaa
DBGET
integrated database retrieval system
