Amborella trichopoda: 18443299
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Entry
18443299 CDS
T02990
Name
(RefSeq) DSC E3 ubiquitin ligase complex subunit 1 isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18443299
Enzymes [BR:
atr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18443299
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18443299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
DUF2921
PHD_NSD
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
zf-RING_UBOX
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
18443299
NCBI-ProteinID:
XP_006853553
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MSWLNLVLGFSEKGGPMGGKLDYWQNIGFLGKNVCQKFDGRRGLRLLLSNVIIWFCVIFN
SFGPVMALRPLREKDSSWSSNQHLLIKREDRDFSPYIAWNITGTYRGTWGTLENNNGSHR
FPEFGKSNGYIIFELVSSVTKITGVHYVQGAIFFRGASDNEHDPGVTQLRVEGVYIWPFR
QLRMVTNSGPDGGLNQEEDYFLSNPYHLLGLFSSQVFQDSPREQLKRKGKHAFLLDLEKH
CNLQIAAQISKIPSDQRDGDRDHYHMEGLVESPALDDEGECFSPILLNASSISMEVYYNK
AVNYTLMVTFISFLQVLLLIRQMEHSSTQSGAAKVSLLMIGQQAIMDAYLCLLHLTAGIL
VESLFNAFATAAFFKFVVFSIFEMRYLLAIWKAGRPNTGEGWETMRRELSILYSRFYGIL
LGGIIIMYELHSFLRPILLAMYSFWIPQIIFNVIRDTRKPLHPHYILGMTFTRLAIPMYA
FGCPSNFMRIEVDKNWCMCLGLFMGFQALVLLLQHYLGSRWFIPRQILPEKYSYYRRFEN
NINAVDCVICMTSIDVVQRSNECMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggctgaatttggtattgggtttttctgagaagggtggaccaatgggtgggaaa
ttggattattggcaaaacattgggtttttggggaagaatgtttgtcaaaaatttgatggt
aggagggggcttagactgctattgtctaatgttattatttggttttgtgttatttttaat
tcgtttgggcctgtgatggctctaaggcctctcagggagaaggatagttcgtggagtagc
aaccagcacctacttatcaaaagagaagatcgtgacttcagcccttacatcgcttggaac
ataacaggaacttatagagggacatggggcaccttggaaaataacaatggctctcatagg
tttccagagtttggaaaatctaatggatatattatatttgagttagtgagctctgtaaca
aagattacgggagtccattatgttcaaggagcgatattttttcgaggagcatctgataat
gagcatgatcctggagtaactcagttgagagtcgaaggggtttatatatggcctttcaga
cagcttcgtatggtaaccaatagtggaccggatggtggactgaaccaagaggaagactat
tttctttccaatccatatcacttgcttggacttttctcatctcaagtgttccaagactct
ccacgtgagcagctgaagagaaaagggaaacatgcttttttacttgatttggagaaacat
tgcaatttacaaattgctgctcagatttcaaagataccatcggatcaaagagatggagat
cgtgatcattaccacatggaaggtttagtggagagtccagcactggatgatgaaggagaa
tgcttctcacctattctcttaaatgctagttcaattagcatggaagtttactacaacaaa
gctgttaactatacgttgatggttacttttatatcttttcttcaagttcttctgttaatt
cgtcaaatggagcacagcagtactcaatcgggggcagccaaagtgtctttgctgatgatc
gggcaacaagcgattatggatgcttatctttgtcttttacatctaactgcagggatatta
gttgaatctctttttaatgcttttgcaactgcggcctttttcaagtttgtggtgttctcc
atctttgagatgagatatctccttgcaatttggaaagcgggtagaccaaatacaggtgaa
ggatgggaaacaatgagacgtgaactatcaatactctacagccgtttctatgggattctt
ttgggaggcattataatcatgtatgagttgcatagttttctgcggcctattctacttgca
atgtactccttctggatcccccaaataatctttaatgtcattcgggatacacggaaacct
ttgcatcctcactacatcttaggaatgaccttcactcggctggctattccaatgtatgcc
ttcggttgcccaagtaattttatgcgcatagaggttgataagaattggtgtatgtgtttg
gggctcttcatgggatttcaagctcttgttctccttcttcagcattatcttggatctaga
tggttcattcctcgtcagatcctaccggagaagtacagctactatagaaggtttgagaac
aatattaatgccgtagattgtgtgatctgcatgacctccattgatgtagtgcagagatca
aatgaatgtatggtaactccatgtgatcacttcttccattctggttgcttacaaagatgg
atggatataaagatggaatgcccaacttgccgccgccccttgcccccagtttag
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integrated database retrieval system
