Amborella trichopoda: 18443354
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Entry
18443354 CDS
T02990
Name
(RefSeq) CRS2-associated factor 1, chloroplastic
KO
K27709
CRS2-associated factor 1, chloroplastic
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18443354
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18443354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
18443354
NCBI-ProteinID:
XP_006853609
UniProt:
U5CPJ4
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MSLCSTPSCFPIFSPSPPLEPTRTPARTHFPSPPEPARTLTLTHLSRWNNANAQRFIRHE
RSQQELEALLRQSKKDQLAENLSDVPFDGNPNDPNPIFRSSGTPSSPSRPSIPGKKSKYS
RPEKLRRYAGKRGRSYSGVGPIRVSGEFYGFSGGSETLEKDDNSSVINGDIQNAEFLAIK
VSDSSETFENNEFPAIRVSEDSETPENHEISLENGDSFDCDLQNTEFPSIRALEDSKTLE
IHKLSSENVPANEISNPRKDTRSSSSKKDPQHPAFRPIRAYKPLRSHGSFSRNSEKSETG
FSVGEHGVSYKLVNAPFEFQYSYTETPKVKPLALREPPFMPFGPSTMPRPWTGRAPLPPS
KKKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGTGPRYVKSREEILGEPLTTEEVNSLIRT
CLKSKRQLNMGRDGLTHNMLDNIHAHWKRLRACKIKCKGVCTVDMDNVCEQLEEKTGGKI
IYRRGGVLYLFRGRNYNYRLRPRFPLMLWRPITPVYPRLIPLVPEGLTLEEAKEMRKKGR
KVPPICKLAKNGVYVDLVKNVKEAFEECELVRINCQGLNASDYKKIGAKLKDIVPCVLIS
FENEHILMWRGRDWTSSPSKLENDSETLEIAEVSSETGAPDPQILPISNPDTSSSALDTE
KCSTTSSQPNQVDSNCIEPNNISMLKVSNNMLTEETEVGPTPTFQDALAISSECGANCSE
ITPESSGSCIDPLVLLESSRSNSQPVLEDSRSEVEVKLNGSESETLASFEGSRSISELSV
TPKGLGSKMVVSMEGSESKTQLDQEGSKGNLMVVLNASGSNDSGTVLKLREAPGTVSEDS
ERKGRMAVLGVLRLRERAVVEGMAVVLDEKSYIDANIVYDRAVKLALTAPKDPVFVHNRH
NKREVLVNKGKERGSELRGRENVGVVQVKAKESSERKVKEGSERKKSSVKVQKRREVHFD
AIPHGNLAVDELAKLLG
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtccctttgctccaccccttcttgtttccctatcttctcaccgagcccacctctcgag
cccactcgaaccccggctcgaacccatttcccgagcccaccggagcccgcccggaccctc
actctaacccacctctcccgatggaacaacgccaacgcccaacgctttatccgccatgaa
agaagccagcaagagctggaagccctacttcgccaatccaagaaggaccaacttgctgaa
aacttatcagatgttccctttgatggaaacccaaacgacccaaatcccatttttaggtct
tcgggcacaccttcttctccttcgagaccgtccattcctggtaagaaatcgaagtattcc
cgccctgaaaaactcaggaggtatgcagggaagaggggcaggagttacagtggggttggg
ccgattagggtttctggagagttctatggtttttcagggggttcagaaaccctagaaaag
gatgataattcttctgtgattaatggtgacattcaaaacgctgaatttctggcaataaag
gtttctgattcctcagaaacctttgaaaacaatgagtttcctgcaattagggtttcggag
gactcagaaacccctgaaaaccatgaaatttccttggaaaatggtgattcctttgattgt
gatcttcaaaacactgagtttccctcaattagggctttggaggactctaaaacccttgaa
atccataaactttcttcagaaaatgtacccgccaatgagatatcaaaccccaggaaagac
accagaagctcatcttcaaagaaggacccgcagcaccctgctttccggccaattagggct
tacaagccccttaggtctcatgggtctttctctaggaattctgaaaaatcagaaactggg
ttttcagtaggagaacatggggtttcttataagttggtgaacgcgccatttgagttccag
tacagttacacagagacccctaaggtgaagccattggctctaagagaacccccatttatg
ccatttgggcctagtactatgccaaggccatggactggtagagccccattgccacctagt
aagaagaagctacctgaattcgattctttcaaattaccaccaccccataagaagggggtt
aaaccagttcaagctcctgggccctatttacctggtactggaccgagatatgtgaagtca
agagaagagattcttggtgagccgttgactactgaggaggtgaattctctgataaggact
tgcttgaagtcgaaaagacaactcaatatgggtagggatggcctgacacacaacatgctg
gataatattcatgcgcattggaaacgcttgcgagcgtgcaagataaaatgcaaaggggtg
tgtacggttgatatggacaatgtctgtgaacaacttgaggaaaaaacaggcgggaagatc
atttacaggagaggaggggtattgtacctttttcgtggcaggaactacaattacagactt
cgacctaggtttcctcttatgctttggagacccataacgccagtgtatccaaggttgatt
ccactggtacctgagggattgactctagaagaggcaaaggagatgcgaaagaagggacga
aaggtgcctccaatatgcaagctagcgaagaatggtgtttatgtagaccttgtgaaaaat
gtaaaagaggcctttgaagagtgtgagctggtgcgcataaattgtcagggcttgaatgcg
agtgactacaagaagataggtgcaaaactcaaggacattgtaccctgtgtattgatctca
ttcgagaatgaacatatattgatgtggagaggacgagactggacatcatctccctctaaa
ctggaaaatgattcagaaaccctagaaatcgcagaagtctcatccgaaactggagctcct
gatcctcaaattcttcctatttcaaatcccgacacttcgagttcagcccttgatacagag
aaatgctctactacgtcaagccaaccaaaccaagttgattcaaattgcattgagcctaat
aatataagcatgcttaaggtttcaaacaatatgctaacagaagaaactgaagtgggcccc
accccgacttttcaagatgcgctggcaatctcatcagaatgtggtgccaattgtagcgag
atcactccagaaagttccggaagctgcattgacccactggtccttttggaaagttctaga
agcaatagccaaccagttttggaagattccagaagtgaggtggaggttaaattgaacggt
tcagaaagcgaaacactggcttcttttgaaggttctagaagcatcagtgagttatcagtt
actccaaaaggtttgggaagcaaaatggtggtctcaatggaaggctccgaaagcaaaact
cagctggaccaggagggaagcaaaggcaatctgatggttgttctgaatgcttctggaagc
aatgacagtggtacagttttgaagttgcgggaagctcctggaactgtgtcggaagattct
gaaagaaagggaaggatggcagtcttaggggtcttgcgacttagagagcgagccgtcgtg
gagggcatggccgtggttctagatgagaaaagttatattgatgctaatattgtgtatgat
agggctgttaagctggctttgactgctccaaaagatccagtatttgtgcacaacaggcac
aataagagagaggttttggtcaacaagggtaaggagagagggagtgagttgagggggaga
gagaatgtgggggtggtgcaggtcaaagctaaggaaagtagtgagagaaaggttaaagag
ggtagtgagagaaagaagagtagtgttaaggttcagaagaggagggaggtgcattttgat
gcaattcctcatgggaatttggctgttgatgagttggccaagctcttgggttag
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