KEGG   Amborella trichopoda: 18443355
Entry
18443355          CDS       T02990                                 
Name
(RefSeq) exosome complex exonuclease RRP46 homolog isoform X4
  KO
K12590  exosome complex component RRP46
Organism
atr  Amborella trichopoda
Pathway
atr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    18443355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18443355
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     18443355
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 18443355
NCBI-ProteinID: XP_006853610
LinkDB
Position
Unknown
AA seq 303 aa
MRYFLFPPTLYVTAWGANTGVFKTGFCLNPISSQNLAVDPNSFPPGFKNSSLEHIDQALM
EDSRVDGRSPNQLRPLTCSRNVLTRPHGSARWCQGDTIVLAAVYGPKAGSKKNESPEKAS
IEVLWKPKSGQIGKAEREYEMILTRTLQSIFLSTIHPNTTTSVIIQVMHDDGALLPCAIN
AACAALVDAGIPLKSLAVAICCGITESGSIILDPTKQEEQEMPAFAYLVFPNSSLAVLPG
TPPLIEGEPVEHGIITSVTHGAMSVDDYFDCLDRGRVASAKLSEFLRKNLAQSQIPNHSS
KAS
NT seq 912 nt   +upstreamnt  +downstreamnt
atgcgctatttcctatttccaccgacgttatacgtgacagcatggggtgcaaatactggg
gtttttaagaccggtttttgcttaaaccctatttcttctcaaaatctagccgttgatccg
aattctttcccgccaggatttaaaaattcttctctggagcatattgaccaggctttaatg
gaggattctagggttgatggtcgctctccaaaccagctgaggcctctcacttgctcacgc
aatgtgttaactaggccccatggctctgcacgttggtgtcaaggggatacaattgtgttg
gctgctgtttatggcccaaaagctggatcgaagaagaatgagagtccagaaaaagcttcc
attgaggtgctatggaagcccaagtcaggacaaattggcaaagcagaaagggagtatgag
atgatattaacgagaacattgcagagcatctttctgtcaactattcacccaaataccact
acatctgttataattcaggttatgcatgatgatggggctctccttccatgtgccataaat
gctgcttgtgccgcccttgttgatgctgggatacctttgaaaagccttgctgttgcaatc
tgctgtggtataacagagagcgggtcaataattttagatcccaccaagcaagaagaacag
gaaatgccagcatttgcttatttggtattcccaaactcttccttggctgtcttgcctgga
actcctccacttattgaaggtgaaccagtcgaacatgggatcatcacctctgttactcat
ggtgcaatgtcagttgacgactattttgattgccttgatcgagggcgtgttgcgagtgcc
aaactctcagagtttcttcggaaaaatttggcacaatcgcaaattcccaatcattcttca
aaggcttcatag

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