KEGG   Amborella trichopoda: 18443357
Entry
18443357          CDS       T02990                                 
Name
(RefSeq) SNW/SKI-interacting protein
  KO
K06063  SNW domain-containing protein 1
Organism
atr  Amborella trichopoda
Pathway
atr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18443357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atr03041]
    18443357
Spliceosome [BR:atr03041]
 Complex B
  Other components
   Prp19-related factors
    18443357
 Complex C
    18443357
SSDB
Motif
Pfam: SKIP_SNW
Other DBs
NCBI-GeneID: 18443357
NCBI-ProteinID: XP_006853611
UniProt: U5D416
LinkDB
Position
Unknown
AA seq 600 aa
MATLKELLPQPKSETTGVYDFSSDPWFKDRFIDPAKSSSNSVSKAKSIPPYGKRAGFVPR
KPEDFGDGGAFPEIHIAQYPLGMGRKEEKRDSKILPLTVDAQGNVAFDAIVKQNENASKI
VYSQHKDLLPKLINDEEKKDEEEEEIAETTQRTKEALEKIVNVRLSAAQPKNVPQQSTDA
TFIKYKPSQQSAAFNSGAKERIIRMVDMPVDPLEPPKFKHKRVPKASGSPPVPVMHSPPR
PVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALYVAE
QKAREAVEMRSKIQRELMLKEKNRKEQELRALAQKARSERTGAGPVVAAVDKGTIDGREE
ISPFNGGERRGDMERMKENVRETKEEREERLKREAIREERRRERERERRLEAKEVAMGKK
SKITRDRDRDISEKVALGMATTGRSGEVMYDQRLFNQEKGMESGFAADDQYNIYDKGLFT
AHSTLSTLYRPKKDTDSDAYGGADEQLEKVLKTDRFRPDKGFAGASEKAGPRDRPVEFEQ
EAEEADPFGLDQFLTEVKKGKKAMDKIGGGGTMKASAGAAMRESYEGGSSRTRVDFERGR
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggcaacgttgaaggagcttcttccccaaccaaagtcggaaaccactggtgtctatgac
ttttcatcagacccatggttcaaagatcggttcattgaccctgcaaaatccagtagtaat
tcagtttccaaagccaaatccatccctccttacgggaaacgagctggttttgttcctaga
aaacctgaagattttggagatggtggggcctttcctgagatccacattgcccagtaccca
cttggcatgggccgaaaagaagagaaaagagactcgaaaatccttcccctcactgtagat
gcccagggaaatgttgcgttcgatgccatagtaaaacaaaatgagaatgcttccaagatt
gtctactcccagcacaaagatttgctcccaaagttgattaatgatgaggaaaagaaggat
gaagaggaagaagaaatagcagaaacgacacagagaacaaaggaagctttggagaagata
gtgaacgttcgtttgagtgctgcacaacctaagaatgttccccaacaatccaccgatgcg
acattcattaaatataaaccttcacaacaatcagctgcattcaattcgggtgcaaaagag
aggattatccgtatggttgatatgcctgttgacccacttgagcccccaaaattcaagcac
aagagggtacctaaagcctcaggttcaccaccagttcctgttatgcattcaccacctcgc
cctgttacagtgaaagaccaacaagactggaaaattcccccttgtatttctaactggaag
aatccaaaagggtacacaatccccttagacaagcgtcttgctgctgatgggcgtgggctt
caagaggttcagatcaatgataactttgcaaagctctcagaggccttgtatgttgcagag
caaaaggctcgagaagctgtagagatgaggtctaagatacaaagggagcttatgcttaag
gagaagaatagaaaggagcaagagttacgtgctctcgctcaaaaggcaaggtcagagagg
actggagcagggcctgtagttgctgctgtagataaaggcacaattgatggacgcgaggag
atcagtcctttcaatggaggtgagagaaggggagatatggagaggatgaaagaaaatgtt
agagagacaaaggaggagagagaagagaggctgaagcgtgaagcgatacgtgaggagaga
aggcgggagcgagagcgggagaggagattagaggcaaaggaagtagccatgggtaagaag
agcaagataacaagggatagggatagggatattagtgagaaggttgctcttggcatggcc
actactggtcgatcaggtgaagtcatgtatgaccaaaggcttttcaatcaagagaagggt
atggagtctggttttgcagctgatgaccaatacaatatatatgacaagggtttgtttact
gcacattctacgctctctactctctacaggcctaagaaggatactgattcagatgcgtat
ggaggggccgatgagcaactcgagaaggtgctcaagaccgatcgattccggcctgataaa
ggttttgctggggccagtgagaaggcaggacctagagataggcctgttgagtttgagcaa
gaggcagaagaggctgatcctttcggtttggatcagttcttaacagaggtgaagaaaggg
aagaaggctatggataaaatagggggtggcggcaccatgaaggccagtgctggtgctgca
atgagggagagctacgagggagggtcaagcaggacccgtgttgactttgaaaggggtcgg
tga

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