Amborella trichopoda: 18443357
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Entry
18443357 CDS
T02990
Name
(RefSeq) SNW/SKI-interacting protein
KO
K06063
SNW domain-containing protein 1
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18443357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18443357
Spliceosome [BR:
atr03041
]
Complex B
Other components
Prp19-related factors
18443357
Complex C
18443357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
18443357
NCBI-ProteinID:
XP_006853611
UniProt:
U5D416
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MATLKELLPQPKSETTGVYDFSSDPWFKDRFIDPAKSSSNSVSKAKSIPPYGKRAGFVPR
KPEDFGDGGAFPEIHIAQYPLGMGRKEEKRDSKILPLTVDAQGNVAFDAIVKQNENASKI
VYSQHKDLLPKLINDEEKKDEEEEEIAETTQRTKEALEKIVNVRLSAAQPKNVPQQSTDA
TFIKYKPSQQSAAFNSGAKERIIRMVDMPVDPLEPPKFKHKRVPKASGSPPVPVMHSPPR
PVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALYVAE
QKAREAVEMRSKIQRELMLKEKNRKEQELRALAQKARSERTGAGPVVAAVDKGTIDGREE
ISPFNGGERRGDMERMKENVRETKEEREERLKREAIREERRRERERERRLEAKEVAMGKK
SKITRDRDRDISEKVALGMATTGRSGEVMYDQRLFNQEKGMESGFAADDQYNIYDKGLFT
AHSTLSTLYRPKKDTDSDAYGGADEQLEKVLKTDRFRPDKGFAGASEKAGPRDRPVEFEQ
EAEEADPFGLDQFLTEVKKGKKAMDKIGGGGTMKASAGAAMRESYEGGSSRTRVDFERGR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgttgaaggagcttcttccccaaccaaagtcggaaaccactggtgtctatgac
ttttcatcagacccatggttcaaagatcggttcattgaccctgcaaaatccagtagtaat
tcagtttccaaagccaaatccatccctccttacgggaaacgagctggttttgttcctaga
aaacctgaagattttggagatggtggggcctttcctgagatccacattgcccagtaccca
cttggcatgggccgaaaagaagagaaaagagactcgaaaatccttcccctcactgtagat
gcccagggaaatgttgcgttcgatgccatagtaaaacaaaatgagaatgcttccaagatt
gtctactcccagcacaaagatttgctcccaaagttgattaatgatgaggaaaagaaggat
gaagaggaagaagaaatagcagaaacgacacagagaacaaaggaagctttggagaagata
gtgaacgttcgtttgagtgctgcacaacctaagaatgttccccaacaatccaccgatgcg
acattcattaaatataaaccttcacaacaatcagctgcattcaattcgggtgcaaaagag
aggattatccgtatggttgatatgcctgttgacccacttgagcccccaaaattcaagcac
aagagggtacctaaagcctcaggttcaccaccagttcctgttatgcattcaccacctcgc
cctgttacagtgaaagaccaacaagactggaaaattcccccttgtatttctaactggaag
aatccaaaagggtacacaatccccttagacaagcgtcttgctgctgatgggcgtgggctt
caagaggttcagatcaatgataactttgcaaagctctcagaggccttgtatgttgcagag
caaaaggctcgagaagctgtagagatgaggtctaagatacaaagggagcttatgcttaag
gagaagaatagaaaggagcaagagttacgtgctctcgctcaaaaggcaaggtcagagagg
actggagcagggcctgtagttgctgctgtagataaaggcacaattgatggacgcgaggag
atcagtcctttcaatggaggtgagagaaggggagatatggagaggatgaaagaaaatgtt
agagagacaaaggaggagagagaagagaggctgaagcgtgaagcgatacgtgaggagaga
aggcgggagcgagagcgggagaggagattagaggcaaaggaagtagccatgggtaagaag
agcaagataacaagggatagggatagggatattagtgagaaggttgctcttggcatggcc
actactggtcgatcaggtgaagtcatgtatgaccaaaggcttttcaatcaagagaagggt
atggagtctggttttgcagctgatgaccaatacaatatatatgacaagggtttgtttact
gcacattctacgctctctactctctacaggcctaagaaggatactgattcagatgcgtat
ggaggggccgatgagcaactcgagaaggtgctcaagaccgatcgattccggcctgataaa
ggttttgctggggccagtgagaaggcaggacctagagataggcctgttgagtttgagcaa
gaggcagaagaggctgatcctttcggtttggatcagttcttaacagaggtgaagaaaggg
aagaaggctatggataaaatagggggtggcggcaccatgaaggccagtgctggtgctgca
atgagggagagctacgagggagggtcaagcaggacccgtgttgactttgaaaggggtcgg
tga
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