Amborella trichopoda: 18443361
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Entry
18443361 CDS
T02990
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
atr
Amborella trichopoda
Pathway
atr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18443361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18443361
03036 Chromosome and associated proteins [BR:
atr03036
]
18443361
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18443361
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
18443361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
18443361
NCBI-ProteinID:
XP_006853615
UniProt:
U5D126
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MPGRASESATTALVPFVPEVKEQLVYRLSHGVQTPASSLSISWSRGNSLRVAIFRQPSLE
SSEEMAGNSGEGDVVELRMGVEDGEIDEVRKRRIAYGSAPAFALLQSRRNLVMASNSFGS
SLHSDWWQHVLEYSRHIRDLLGNLKSSPVSVIEDPKALLKSSEKPTSSKAAWELMEFFYV
DKLSLSWLPERLVDWLADYDSLLSGTDMTVHSKLASLQKKLVELQFIEDSKEYWEAIASA
LAVGWLDIVVKLLRLHGSYQLDQIDNREIENGLVEAIAVLVSTMPRMRPELRAGGLGQCF
DTKPDFVKAWEKWRGQVAKLDCSAFWVKCDHRQTMDGLKNLLQIMLGNLDDLCAATYQWM
ELLTSHFLFIRPFTMGLEAMHSLAQKCILLKPTSDGNRLMDLLLGILGDNTEVVLAECSR
TFGPWMVVHAIELLTAKSHQAEVVLHEQRYNLGGISIEELHRLVYAQVLSSHALTWQLAP
IYLAACPKQGLGLLELLLYKQPMRHNRQILKNIEICRLYELGQIESSIMKIAGMHHWKHG
RKGAGIYWLQRAGDEARLNEIAQQLFGLVGKSFSDESFRQWERLIELLGVEGENLGGLEF
LHKYRDFKKSLQMIPDDVSIEPSNEKAVNAAVQAVDALILLMKSPSTPQRFWLPLLQDSM
KLLNWRHRPLLNVSQTNLLLNKLQELSLARLRPDYCDSDLPHQVLSSIRLALAMNLGRAM
IQE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtagagcttcagagtcggccactacagccctggttccctttgttccagaggtc
aaagaacaattggtctatcgcctctctcatggcgtccaaaccccagcttcttctctctct
atctcgtggtcgagagggaactcgctgagagttgctatttttcggcagccatcgctagaa
tccagcgaggaaatggcaggaaactcaggcgagggggacgtggtggagttgaggatggga
gttgaagatggtgaaatcgatgaggtcaggaaaaggaggattgcttatggctctgctcct
gcttttgctttgttgcaaagcaggaggaacttggtcatggcgtctaatagctttggttct
tcactccacagtgactggtggcagcatgttttggagtacagtagacatataagggatttg
ctgggaaatttgaagtcttctcctgtttcagtgattgaagatccaaaagctcttctaaag
tcatctgagaaaccgacctcttcgaaggctgcatgggagttgatggaatttttttatgtg
gataagctctcactttcttggcttccagagcgtcttgttgattggttagcagattatgat
agtctcctttctgggacagatatgactgttcattcaaagcttgcttctttgcaaaagaaa
cttgttgagctgcagttcattgaggattccaaagagtactgggaagcaattgcatctgca
ctcgcagttggatggcttgatattgtggtgaaattgttgaggttgcatggatcttatcag
cttgatcagattgacaaccgcgagattgaaaatggacttgttgaggccattgctgttctt
gtttcaacaatgccacgtatgcgtccagagttacgagctgggggattaggacagtgcttt
gatactaagcctgattttgtaaaggcttgggagaaatggcgaggccaagtagctaagctt
gattgcagtgcattttgggtaaaatgtgatcatcgtcaaaccatggatggcttgaagaat
ttgttacaaattatgctggggaacttggacgatctttgtgctgccacttaccaatggatg
gagctgcttacatcacactttcttttcatcagaccattcacaatgggtttggaagccatg
cacagtttagctcagaagtgcatcctgctgaaacccacatcagatgggaaccggttgatg
gatcttcttcttggaatacttggagataatactgaggttgtcttagcagaatgctcaaga
acatttggtccttggatggtggtgcatgccatagagttgttgactgccaagagccaccaa
gcagaggttgttttgcatgagcagcgctataacttggggggaattagcatagaggaactt
catcgcctcgtatatgctcaagttttatcatctcatgctttaacttggcaacttgctcca
atatatcttgcagcatgtccaaagcagggcttgggattattggaacttttattgtataag
caacctatgcgacataatcgccaaatacttaagaatattgagatttgccgattatatgag
cttggtcaaatcgagtcaagcattatgaagattgctggaatgcatcattggaagcatggc
aggaaaggtgctgggatctattggcttcaacgagcgggtgatgaagctcgactcaatgaa
attgctcagcagctatttgggcttgttgggaagtcattttctgatgaaagttttaggcaa
tgggaacgattgattgagttgctgggtgtcgagggcgaaaatctgggaggactcgagttt
cttcataagtacagagatttcaagaaatcacttcagatgattccagatgatgtcagcatt
gaacctagtaatgagaaagctgtcaatgctgctgttcaagctgtggatgctctcatactt
ctcatgaagagcccatcaacaccccaacgcttttggctgcctctcttacaagattcaatg
aagttgttgaactggagacaccgccctctcctcaatgtctctcagaccaacttgttgctg
aacaagcttcaagagctctctttggcgaggctacgccctgattactgtgattcagatctt
ccccatcaggttctgagctccatcagattggcactagcaatgaatcttggtcgagcaatg
atacaagagtga
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