Amborella trichopoda: 18443415
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Entry
18443415 CDS
T02990
Name
(RefSeq) ABC transporter G family member 42
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
atr
Amborella trichopoda
Pathway
atr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
18443415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atr02000
]
18443415
Transporters [BR:
atr02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
18443415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
ABC_trans_N
AAA_21
AAA_29
AAA_16
AAA_14
AAA
AAA_28
AAA_33
AAA_25
AAA_30
nSTAND3
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
18443415
NCBI-ProteinID:
XP_011626739
UniProt:
U5CY98
LinkDB
All DBs
Position
Unknown
AA seq
1492 aa
AA seq
DB search
MEKFDKVWGSGRRMSRNMSRNMSRNMSRNMSRRTNWGVEDVFARSGHSRRADEDEEALKW
AALEKLPTYDRLRTSILKSYTEEERLVQHQEVDVRKLDINQRQEFIERLFRIAEEDNEKF
LRKLRNRIDKVGIRLPTVEIRFEHLTVQAECHVGSRALPTLLNASRNLAESALGLAGIKL
TKTTTLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKSKGEVTYNGHRL
NEFVPQKTSAYISQHDVHIGEMTVKETLDFSARCQGVGTRYELLSELARREKDAGIFPEA
EVDLFMKATAMKGVQSSLQTDYTLRILGLDICRDTIVGDEMQRGISGGQKKRVTTGEMIV
GPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLTDATVFMSLLQPAPETFDLFDDIVLLS
EGQIVYQGPREHVVEFFESCGFRCPERKGTADFLQEVTSKKDQAQYWVDKRKPYRYIPVS
EFAGKFKRFHVGMNLENELAVPYDKSRSHKAALVFTKYSVGKWELLKTSFAKEWLLIKRN
SFVYIFKTVQIILVAFIGATVFLKTRLHTNTEEDGGIYIGALLFGVVCNLFNGFAELSMT
IQRLPVFYKQRDLLFYPAWVFTLPNMLLKVPISVLESTAWMVMTYYTVGFAPQASRFFKQ
FLIIFLIQQMASGLFRVTAGICRSVTIANTGGAMSLLMIFMLGGFILPRGYIPIWWKWGY
WASPLSYAYNAITVNEMFASRWMTKRAPNRTPLGIAVLVNFDVFPTSNWFWIGAAGLFGF
IVLFNVCFTLSLVYLNPIGKHQAVISEETVAEMESQQEGTSETPRIKVSGSRKEHKRSLS
AADGNNTREMAIRRLSSKTDGLSRNADSALEAATGVAPKRGMVLPFPPLAMSFDEVNYYV
DMPPEMKDQGVTEDRLQLLRGVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEG
DIKISGYPKNQETFARISGYCEQTDIHSPQVTVRESLIYSAFLRLPSEISKEDKMIFVDE
VMELVELDNLRDAIVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI
VMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGSNSHKIIEYFE
AIPGVPKIHDKYNPATWMLEVSSIAAEVRLNMDFAEYYRESSLHQRNKVLVKGLSTPPPG
SKDLYFPTKYSQPLAGQFKSCLWKQWITYWRSPDYNLVRYCFTLVCALLLGTIFWKIGEQ
RESSVDLNVIIGAMYAAVLFVGVNNCSTVQPLVAIERTVFYRERAAGMYSALPYAISQVI
TEIPYVLFQTTFYTLIVYSMVSFHWTAVKFFWFYFITFFSFLYFTYYGMMTVSITPNHQV
AAIFAAAFYSLFNLFSGFFIPKKRIPKWWIWYYWICPLAWTVYGLIISQYGDLEDDIIVP
GGGKQKIKDFVVSYYGYDTGFMGPVAGVLVGFATFFAFVYAWCIKSLNFQQR
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggagaagttcgacaaggtttggggctctggtagaagaatgagccgcaacatgagtaga
aacatgagtagaaacatgagtcggaacatgagcagaaggaccaactggggagtggaggac
gtctttgcaaggtccggacatagcaggagagctgacgaagatgaggaagccctgaaatgg
gcagctcttgagaagctcccgacctatgatcggttgagaaccagtatactgaagtcgtat
acagaggaagagagactggttcaacaccaggaagtcgatgtgagaaagcttgatataaac
cagagacaagagttcatagagagattgttcagaattgcagaggaagataacgagaagttc
ttgaggaagctcaggaataggatcgacaaagttggaatcaggctccctactgtggagatt
cgatttgagcacttgacagtgcaagcagaatgccatgtagggagcagagccctccctaca
ctattgaacgcatcaagaaaccttgcggaatcggctcttggattagcaggaatcaagctt
acaaagacaaccaccctcaccattttaaaagatgcgtcagggatcataaaaccttcgagg
atgacacttttgttggggcctccatcttcagggaagacaacccttttgctggctcttgct
ggaaaattagacccaagcttgaagtcgaagggagaagtcacatacaacggccaccgattg
aatgagtttgttcctcagaagacttcagcttacattagccagcatgatgtacacattgga
gagatgactgttaaagaaactctcgatttctctgcaaggtgtcaaggggttggaactaga
tatgagcttctatctgaacttgcgaggagagaaaaggatgccgggattttccctgaagct
gaagtcgatctttttatgaaggcaaccgctatgaaaggagttcagagttcacttcaaact
gactacacactaagaattcttggcctggatatatgtagagacactatagttggagatgaa
atgcagagaggaatctctggtggccagaaaaagagggtcactactggggagatgattgtt
gggccgacaaagaccctgtttatggatgagatatcaactggcttagacagctccaccacc
tttcaaatagtaaagtgccttcaacaaattgtgcacttaactgatgccaccgttttcatg
tcgcttctccagcctgctcctgagacctttgatctctttgatgacattgttttgctatct
gagggtcaaattgtgtatcaggggcctcgagaacatgtggtcgagttctttgagtcctgt
ggcttccggtgccctgagagaaagggtactgctgacttcttgcaggaggttacttcaaag
aaggatcaagcgcaatattgggttgacaagagaaaaccatatcgctacatccctgtttca
gaatttgcaggaaaattcaaaaggtttcatgttgggatgaacctagagaatgaactcgct
gttccatatgacaaaagcagaagccacaaagcagctctggttttcaccaagtactctgtt
gggaaatgggagcttcttaagacctcctttgcaaaagaatggcttctcatcaagagaaac
tcctttgtttatatcttcaagacagttcagatcatattagtggctttcatcggagcaact
gtgtttttgaagacacggcttcacactaacacagaagaagacggtgggatatatatagga
gcacttctatttggggtggtatgtaacttgtttaatggatttgctgagctttcaatgacc
atccagaggcttcctgtcttttacaagcagagagatctcctcttctaccctgcatgggtt
ttcactctcccaaatatgctactcaaagtacccatatcagtgcttgagtcaacagcttgg
atggtaatgacttattacacagttggcttcgcgcctcaagctagcaggtttttcaagcag
tttttgatcatattcttgatccaacaaatggcatctgggctttttagggtcaccgctggg
atttgcaggtcagtgaccattgccaacaccggaggagctatgtctttgcttatgatcttc
atgctcggaggctttatccttcctcgaggatacattcctatttggtggaaatggggctac
tgggcttcacctctttcttacgcatacaatgccatcaccgtgaatgaaatgtttgcttca
agatggatgaccaagagggcgcctaatagaacccctttgggtattgcggttcttgttaat
tttgatgtttttcctacgagcaactggttttggattggggcagccggtctgtttggattt
attgtgctcttcaatgtttgcttcaccctttcactcgtgtatctgaatcccattggaaag
catcaagctgtgatttctgaagaaacagttgctgaaatggagtctcaacaagagggtacc
agtgaaacaccaaggatcaaggtatcggggtccagaaaagaacataagcggtcattgtct
gccgcagatgggaacaacacaagagaaatggcaattaggagattgagcagcaaaacggat
gggcttagtcgtaatgctgattcagctctagaagcagctacaggagtggctccaaaaaga
gggatggttcttccatttccacctcttgccatgtcgtttgatgaagtcaactattatgtc
gacatgcctcctgaaatgaaggatcagggtgtaacagaagatagattgcaactactgaga
ggagtaacaggagcgtttaggcctggagttcttactgcccttatgggagttagtggagct
ggtaaaacaactctaatggatgtgcttgctggtaggaaaacagggggatacattgaaggg
gatatcaaaatctctggttaccccaagaaccaggagacctttgcgagaatttcgggttat
tgtgaacaaactgatatccactctccccaggtcactgttagagaatcattgatctactct
gcattccttcgcttacccagtgaaattagcaaggaagataaaatgatctttgtggatgaa
gttatggaattagtagagctcgataatctcagggatgctatagtggggcttcctggtgtg
tctggtttatcaacagagcagaggaagcgcttaactattgctgttgagcttgtggcaaat
ccttcaatcattttcatggatgagcccacttcaggacttgatgcaagagcggcggctatc
gtaatgaggacggttcggaacacagtagatactgggcgtacagttgtttgtacaattcat
caacccagcattgacatctttgaagcatttgatgagcttctactgatgaagagaggtggc
caagtaatctattcagggcctctgggcagtaactcccacaaaatcattgaatattttgag
gccattccaggtgttccaaaaatccatgacaaatacaaccctgcgacatggatgcttgaa
gtgagctccattgctgctgaagttcgtttgaatatggactttgctgagtactacagggaa
tcgtctttgcaccagcgcaataaggtactggttaaggggttaagcactccccctccagga
tcaaaggacctgtatttccctacaaagtactctcaaccactggcggggcaattcaagtct
tgcctttggaaacaatggatcacttactggagaagccctgattataaccttgtgcgctat
tgctttacccttgtttgtgctctacttcttggaaccatcttctggaaaattggcgaacaa
agagagagctcggtggatctgaatgtgattattggcgcaatgtatgcggctgtgctcttt
gtgggtgtcaacaattgttccactgtgcaaccgcttgtggccatagaaagaaccgtattt
tatagagagagagctgccggaatgtactctgccttgccatatgccatatctcaggtgatc
actgaaataccatatgtgttattccagactacattttatactttgatagtgtattctatg
gtgagctttcactggacggcagtcaagttcttctggttctacttcattaccttcttctcc
ttcctctacttcacttactatggtatgatgaccgtctctatcacccccaaccatcaagtt
gctgccatctttgccgctgccttctactctctcttcaacctcttctcaggattcttcatc
cccaaaaagaggatcccaaagtggtggatatggtactattggatctgccctcttgcctgg
accgtctatggtctcatcatctctcaatatggggacttggaggacgacatcattgtgcct
ggtggaggtaagcaaaaaatcaaggactttgtcgtcagttactatggctatgacactgga
ttcatgggtccagttgctggagttcttgttggattcgccacgtttttcgcctttgtctat
gcctggtgcatcaaatccttgaacttccaacaaagatga
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integrated database retrieval system
