Amborella trichopoda: 18443496
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Entry
18443496 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18443496
KO
K04485
DNA repair protein RadA/Sms
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18443496
DNA repair and recombination proteins [BR:
atr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
18443496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
ChlI
ATPase
DnaB_C
Zn_ribbon_LapB
AAA
AAA_22
Lon_C
AAA_16
NACHT
AAA_19
AAA_24
RecA
nSTAND3
ABC_tran
NTPase_1
AAA_5
TniB
Isochorismatase
Motif
Other DBs
NCBI-GeneID:
18443496
NCBI-ProteinID:
XP_006853747
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MHTVSHLYSLSNMFAFRRIFLKNHQALTLNKIPFRNPRFLCSNFPQELQRCYSRTSFSIE
KASSSSNDERSDEETENPTVLDKSTTRNACFSLKKKVGKNASQYICEECGDTYGQWWGTC
QSCKKVGTIKHLSELDHNSAKTFGLEASGNALRSWFSSGTVNLVPQKLVDVKKGLSRRRW
RIPLPGLFGMEVARVLGGGLVPGSLVLIGGDPGIGKSTLLLQMAAMIAEGGGINDPAPVL
YVSGEESVDQIGSRADRLRINTEDLFLYSSTDVEDILNTVQALSPRALIVDSIQTMYLRE
VTGSAGNISQVKECTSALLRFAKQTSIPVLLIGHVTKTGDIAGPRVLEHIVDTVLYMEGE
RLLTHRLLRSVKNRFGSTDELGIFEMLDCGLRPVTNPSLFFLSENIGDSDVLAGLAVTVI
VDGSRAFLIEIQALCCPGSTAAKQINGVSASRAEMIISVLTKQAGLKLQENSIFLNVVSG
LKLEETAGDLAVAAAICSSFLEFPLQNDIAFIGEVGLGGELRTVPRIEKRVNELSKLGYK
KCVIPKSAEKSLGGLDLEGLTILSCRNLKEFINKVFRNS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcatactgtctctcatctctattctctctcaaacatgttcgcttttcgtcgaattttc
cttaaaaatcaccaagccctaacgctaaacaaaattcccttccgaaaccccagatttcta
tgctctaattttccccaagagttgcagagatgctattctcgaacctccttttccattgaa
aaagcttcctctagctcaaatgatgaacggtcagatgaagagaccgaaaaccctacggtt
ttagacaaatcgacaacgaggaatgcgtgtttctccctgaaaaagaaagtgggcaagaat
gctagtcaatatatttgtgaggaatgtggagatacatatggtcaatggtgggggacgtgt
caatcatgcaagaaagttggcacgatcaagcatttatcggagttggatcataattctgct
aaaacatttgggctcgaagcttcaggaaatgctcttagatcgtggtttagcagtgggact
gttaatttagtgccccagaaattggtggatgttaagaaagggcttagcaggcggcgatgg
cggattcctctgcctggactttttggaatggaggtagcacgggtgttaggagggggtctt
gttccgggctccttggttttgattggtggtgatcctggaattggcaaaagtacacttctg
ttacagatggctgcgatgattgcggaaggaggcggtataaatgacccagctccggttctc
tatgtttctggtgaagagagtgttgaccaaattgggagcagagctgatcgattgaggatc
aacacggaggacctcttcctatactcaagtacagatgttgaggatattctcaacacagtc
caagctctttctcctcgtgctttgattgtagactctatacaaaccatgtatttgagggaa
gttactggtagtgcagggaacataagccaggtgaaggagtgtacatcagctttattgcgc
tttgctaaacaaacaagtattccagttcttttgattgggcatgtgacaaaaactggagat
atagctggacctcgcgttttggagcatattgtagacactgttttgtatatggaaggggag
agattattgactcatcgtttgttacggtctgtgaagaaccgttttggatccactgatgag
cttggcatatttgaaatgttagattgtggtcttcgaccagtcaccaatccaagtttgttc
ttcttaagtgagaatattggtgattctgatgttttagcggggcttgcagttactgtgatt
gttgatggttcgcgggcatttctcattgagattcaggcattgtgctgccctggctccaca
gctgcaaaacaaataaacggggtctcggcttctagagctgaaatgattatttctgttttg
acaaagcaagcaggtttgaaactacaagaaaatagcatttttctcaatgtagtaagtggg
ttgaagttggaagagacagcaggagatcttgcggtagcagctgcaatttgcagcagcttt
ttggagtttccccttcaaaacgatatagcatttattggagaggttggccttggtggcgag
cttcgcacggtgccaaggatagaaaagcgggtaaatgaactctccaaattggggtataag
aaatgtgttattcctaaatcagctgagaaatctttgggtggtctggatctcgaaggacta
actatattgagttgcagaaaccttaaggagttcatcaataaagtcttccgtaacagctga
DBGET
integrated database retrieval system
