KEGG   Amborella trichopoda: 18443535
Entry
18443535          CDS       T02990                                 
Name
(RefSeq) RNA polymerase sigma factor sigC
  KO
K03093  RNA polymerase sigma-I factor
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atr03021]
    18443535
Transcription machinery [BR:atr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     18443535
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Phosphonate-bd
Other DBs
NCBI-GeneID: 18443535
NCBI-ProteinID: XP_006853783
LinkDB
Position
Unknown
AA seq 564 aa
MVPGFYLHRQWSFGSHLNSNGFSQYSHISPPFHQPAHNTSPLKSKQPSIESAKASTLSVI
PEETERLLGDCTKDFPYFFGDIQNANSSHDITEEMKMNINKNKPDASLYVIDKAELPIAE
DTFSNVAGLPHFSFLFENLEKIEGIIVDSGNARLEREILLHIERLGALKLFHAFLSRTLK
DPKILDVTGTCPEHAMVQPMDEQADGYIVSSGKKVERKAQRERALKKVTDEPIVCSSLKR
VKKSTKSINAALTHKGHPGNSKSRSHLRAQSEVEMSRGVQEVAKLEKIRANLEENLGRDA
SFSVWAEAAGINEKVLKQQLHFGWFCRDKLLRSTRPLVMYLAKSYRGRGIGFEDLLQAGS
LGVLQGAERFDHTRGYRFSTYVQYWIRKSLSALVARHSRGVQIPMALNKVLNQTVKAKRA
LHQMHGRHPREVEIAEFTGLSLVNVRLANKCLRVHGSIDQRIGDNWGATYMEVTADTFIE
TPEKMVMKQHMREAIHEVLVNLHPREKQVLMLRYGLWDGRCKSLEEIGRLYNVTKEWIRK
IEKMALEKVRKEEVQCNLNFFLNS
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggttcctggtttctatttacacaggcaatggagcttcggatcacacctcaactcaaat
gggttttctcaatactctcatatctcccctccatttcatcaaccagctcacaatacttct
ccattgaaaagcaagcagccctcaattgaatcagcaaaagcgtcgaccctgtcagtcatc
cctgaagagactgaaagactactcggtgattgcacgaaagatttcccatatttctttgga
gacatacaaaatgcaaatagcagccatgacattactgaagagatgaagatgaatatcaat
aagaataagcccgatgcgtccctatatgtgattgacaaggcagaactacctatagctgag
gatacattttctaatgttgctggtttaccacacttcagtttcttatttgaaaaccttgag
aaaatcgaaggcatcatagttgattcaggcaatgcaagactggagagagaaatactgttg
cacatagagaggctcggagcattgaaattattccatgcttttctatctaggaccctaaaa
gatcccaaaattttagatgttactggaacatgtcctgaacatgcaatggttcagcccatg
gatgagcaagcagatggttacattgtttcctctggtaaaaaggtggagagaaaagctcaa
agagagagagctttaaagaaggtgaccgatgagcccattgtgtgctcttctttgaaaaga
gttaaaaaatcaactaaatctatcaatgcagccttgacccataagggtcatcctggaaat
tcaaaatccagaagccatttgagagctcaaagtgaagtggagatgtcaagaggggttcag
gaagttgcaaaattggaaaagattcgtgcaaatttggaagagaatcttggacgagatgca
agtttttctgtgtgggcagaggcagccggaatcaatgagaaggtgttgaagcagcaactg
catttcggttggttctgcagagataagcttctaagaagcacccgtcccttggttatgtac
cttgcaaaaagttacaggggaagggggatcggctttgaagatctacttcaggcagggagc
ttgggtgttcttcaaggtgctgagcggtttgaccacacaaggggttatcgtttctctacc
tatgtccagtattggatcagaaaatctctctctgcattggtggcacggcactccagggga
gtccagattcctatggccttgaacaaggtattaaaccaaactgtcaaagccaaaagggct
cttcatcagatgcatggaagacacccgagggaagttgagattgcagagttcaccggcttg
tcactagttaatgtaagattggcaaacaagtgcttgagagttcacggttccattgatcag
agaattggtgacaactggggtgcaacgtatatggaagtaacagctgatacattcattgaa
acacctgagaaaatggttatgaagcagcatatgagagaagccatccatgaggtcttggtc
aatttgcaccctagagagaagcaggtattgatgctgagatatggtctttgggacggtaga
tgcaagtcgcttgaagagattggaaggctatacaatgtaaccaaagaatggattagaaag
atagagaaaatggctctggaaaaggttaggaaggaggaagtccagtgcaatctaaacttc
tttctaaactcataa

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