Amborella trichopoda: 18443577
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Entry
18443577 CDS
T02990
Name
(RefSeq) zinc finger CCCH domain-containing protein 59 isoform X2
KO
K24939
CWF19-like protein 1
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18443577
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18443577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
18443577
NCBI-ProteinID:
XP_006853826
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MAPPRILLCGDVLGRFNIVFKRVTSVSKSNGPFDALFCVGQFFPNNAEEVDEMMRYIRGD
EPVPIPTYFIGDYGAGALKLLSSAGSQYGFKTDGIKICENLFWLKGSGRFNLHGLSVVYL
SGRRSSNDQLIGAFNGDDIDALRALAEEPGIFDLFLTNEWPQGISNRAYTSNPRPEILDP
SGSDVVISELAAELKPRYHIAGAKGIFYAREPYSNNDAVHVTRFLGLACVGNSTKQKFIH
AISPTPACSMSATDIALKPLDTTPSPYLIVKDVHMNESTKQTGLSLDVQYWRYDTSRKRQ
RDQSEDGGRLCFSFISTGSCSRAEKCQFVHDDAFREKYLKGACFDFINRGKCERGSGCKF
RHSLSFEDDGSGINLNRPNDNTGVASSEGSTGRRKHCWFCLSSPNIESHLILSVGETCYC
TLAKGPLVLDHVLIVPTEHFPSTLSLPSSSVIEMQKYKNSLKAYFKSQKKATVIYEWVFN
HSKSIHANLQVVPVPLSKASYLRGHFISAARKSGFEFEVIRPDDHGNDAWKDLKRSFDEK
FSFFYVELPEGTILAHSVEDEKGISPHFGREVLASLLDQMDRVDWRKCKDSKEDEIRMVE
EFKKKFESFDPM
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacccagaatccttctatgcggcgacgtcttaggccgcttcaatatcgtcttc
aagcgagtcacatctgtgagcaagtctaatggccctttcgatgccctgttctgtgtgggt
cagttcttccccaacaacgctgaagaagtcgatgagatgatgcgttatatacgtggggat
gaaccagttccaattcccacctatttcattggtgattatggagctggtgccttgaagctc
ttgtcatctgctggttcccaatatggatttaaaactgatgggataaagatttgtgaaaac
cttttctggctaaaggggagtgggagatttaaccttcatggtttgtctgtagtttactta
tctggccgacgctcatcaaatgatcaactaatcggagcatttaatggtgatgacattgat
gcattgcgagctttggctgaagaacctgggatatttgatctgtttctaactaatgaatgg
ccacaaggaatttcgaatcgggcttatacatccaatcctcggccagaaattttggaccct
tctggtagtgatgttgtcatctcagagttggctgctgagttaaagcctcgttatcatatt
gcaggtgctaaagggatattttatgctcgagagccttattctaacaatgatgcggtacat
gtgacacgttttcttggtcttgcatgtgtggggaacagtactaagcagaagtttattcat
gcaatttcacccaccccagcatgttcaatgtctgctactgatattgccttaaagccatta
gatactacaccatccccctatttgatagtcaaggacgttcatatgaatgaatcaacaaaa
caaactgggttatcattggatgtgcaatattggcgttatgatacatctcggaagcgccaa
agggatcaaagtgaggatggtggaagattgtgcttcagtttcatttctacaggttcttgt
tcacgagctgaaaaatgtcagtttgtacatgacgatgcgttcagggagaaatatttgaaa
ggtgcttgttttgatttcataaacagagggaaatgtgaacgaggttctggatgcaaattt
cgtcacagtttaagtttcgaagatgatggcagtggcataaatttgaacaggccaaacgac
aatactggagttgcatctagcgagggaagcactggtcggaggaaacattgttggttttgt
ttatcaagtcccaacatagaatcacatctcatactgagtgttggagaaacctgttactgt
acgctagcaaaaggtccattagttttagatcatgtcctgattgtaccaactgaacatttc
cctagtactttatctcttccatccagttcggtgattgagatgcagaaatataaaaattcc
ctgaaggcatattttaagagtcaaaagaaggcaactgtcatctatgagtgggttttcaac
catagtaaatcaattcatgctaatcttcaggttgttcccgtgccattgtctaaagcttcg
tacctccgagggcattttatttctgctgcaagaaagagtggatttgagtttgaagtaatt
aggcctgatgatcatggcaatgatgcatggaaggatctgaaaagatcatttgatgagaaa
ttcagttttttctatgtggaacttccagaaggtaccatactggcacattctgttgaggat
gagaaaggaatatctcctcattttggacgcgaggttctagccagcttgcttgatcagatg
gatagagttgactggaggaaatgtaaagacagcaaggaagacgaaattcggatggtggaa
gaatttaagaagaaatttgaatcttttgatcctatgtga
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