Amborella trichopoda: 18443597
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Entry
18443597 CDS
T02990
Name
(RefSeq) protein indeterminate-domain 11
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18443597
Transcription factors [BR:
atr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
18443597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
DUF7128
Motif
Other DBs
NCBI-GeneID:
18443597
NCBI-ProteinID:
XP_006853846
UniProt:
U5D4M7
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MSNLTSACGEISVSSGNRAENSSSHSQPIASPNPALVKRKRSLPGNPDPDAEVIALSPKT
LMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVKKRVYVCPEPSCIHHDP
ARALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR
RDSFTTHRAFCDALAQESGRPTTSSLNPLLPPQLISSTISLIPPPSVVPPLMLHQEIHNS
GLSQNPLELPPPFFSNQSDPELSHFHGLSSHASHSNNSGNTMSATALLQKAAQMGATMSR
KEPPQMTTNAPTTSGFAQCFSSSGTTSLKEMMLSLSRSGFQSFEDGFNGIRRQSDNLEGM
LNHYRSGEDAQEELTRDFLGLKALSQFGIGGLDGCMSSYGQSSTDGLNHNLQNESTLFSN
SKAWQG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatttaacgagtgcatgtggtgaaatcagtgtttcttctggtaatagagctgaa
aacagcagctctcacagtcagccaattgcttctccaaatccagcacttgtgaagagaaag
agaagccttccaggcaacccagatccagatgcagaagtgatagccttgtctcctaagaca
ctcatggcaaccaacagattcgtttgcgagatctgtaacaaagggtttcagagagatcag
aaccttcaacttcatagaagagggcataatttgccatggaaactaagacaaagaagcagc
aaagaggtgaagaagagagtctatgtgtgccctgaaccttcatgtatccaccacgatccc
gcgagggctctcggggacctcacaggaataaagaaacatttttgcaggaaacatggtgag
aagaagtggaaatgtgagaaatgctcaaagagatatgcagttcaatctgattggaaagct
cattctaagacctgtggaaccagggagtacagatgtgattgtggaaccctcttctcaagg
agagacagctttacaacccacagagccttttgtgatgcactggctcaagagagtgggaga
ccaacaacatcttctctcaacccactcttgcccccacaactcataagctcaacaatttcc
ctaattccaccaccatcagtggtgccgccattgatgcttcaccaagagattcacaactct
ggtctatctcaaaaccctctcgaactcccaccaccattcttctcgaatcaatcggacccc
gaactctctcacttccatggactcagcagccacgcttctcattctaataacagtggaaat
accatgtcggccactgcattactacaaaaagcagctcaaatgggggcaacaatgagcaga
aaggaaccacctcaaatgaccactaatgcccctacgacctctggtttcgcacaatgcttt
tcttcatctgggacaacaagcttgaaagagatgatgctctctctttcaagaagcggtttt
cagtcgtttgaggatgggtttaatggaatcagacgacagtcagataatttggaggggatg
ctgaatcactatcggtccggagaagatgcacaagaggagctcaccagagactttttaggg
ctaaaggccctttcacagtttggaattggaggtcttgatgggtgcatgagctcttatgga
cagagctccactgatggccttaaccacaatctccaaaatgagagcacactcttctcaaat
tcaaaagcatggcaaggttag
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