Amborella trichopoda: 18443754
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Entry
18443754 CDS
T02990
Name
(RefSeq) far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18443754
03041 Spliceosome [BR:
atr03041
]
18443754
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
18443754
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18443754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
18443754
NCBI-ProteinID:
XP_006853998
UniProt:
U5CZP6
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MAEELQFSSRSENKRKFEDPTTAGPRRPTGFSSPPPDSGEKPAYDLSNSNGGGVVPEEIE
IAKQKAQEIVARLVGNADAKRVRVDDGTEKGADGYRPSVDLGQKLPGSHMINSQGNALPP
STYPGAYGFQGTSKKIEIPNGRVGVIIGKSGDTIKYLQLQSGAKIQVTRDMDADPTSQTR
PVELLGTPEQISKAEQLINDVLAEAEAGGSGILARRFGTAHSGSEQFVLKVPNNKVGLII
GKGGETIKNMQSQSGARIQLIPLHLPPGDASTDRTVQIDGTKEQIEMAKQLVNDIVSENR
LRNPPMSGGYIQQGYRPPRPPANWGPPGPPPTQQPGYGYPQTGAYPTPPPAPQFNSTLPQ
PPYSGYPQQASSGWDQPPPAPSQPTPQGTSYDYYGQQQQAPPPQGTQQSSMDNTNSTSTT
TYGYNQQPPPANYTQQGSYGEPSYPNQPVAQGYGQQSYGGSYQAPSTTTQPSYGQQPTNP
QQGYTQSYSAPPPYEAGPTPPSSYGPQNPSSQQASGPVGYNQAGPTGYGAPPSSQPYVNP
PPQAGYGQAGPTSVPPTNYGQKPPVQPLYTGQPASTTQTGSIQPGYNPQVGSTQPGYGGP
PPSAPSYGQQSYGAPVASQPAPYGAPPTYNDQYGAYSQPPVYGSDAAPAAQAPPVQAGVV
PKASPQS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagctccagttctcttctcgaagtgagaacaagcgaaagtttgaagaccct
acaactgctggtcctcgaagaccgactggtttttcttctcctcctcctgattcaggagag
aagcctgcctatgatttgagtaatagcaatggaggtggagttgtgccagaggagatcgag
atagcgaagcagaaagcgcaggagatagtggccaggcttgtggggaatgcagatgctaag
cgtgttcgagttgatgatggaactgagaagggtgccgatggatatcggccttcggttgac
cttggtcaaaagcttcctggttcgcatatgatcaattcacagggtaacgcgcttccacct
tcaacatacccaggtgcatatggctttcaaggaacaagtaaaaagattgaaataccaaat
ggcagggttggtgttatcattgggaagagtggcgatacaatcaaatatcttcaactccag
tctggtgccaaaattcaagtaacaagagacatggatgctgacccaacatctcaaacaagg
cctgtagaactcttgggtactcctgagcaaatcagcaaggctgaacagttgatcaatgat
gtccttgctgaggctgaagcagggggatctggcatacttgctcgaaggtttggtactgct
cattctggaagtgagcaatttgtactgaaagttccaaataacaaggtgggtttgatcata
ggcaaaggtggtgagacaattaagaatatgcaaagtcagtctggagctcgtattcagctt
atacctctacatctccctcctggcgatgcatcaacagataggacagttcagattgatgga
accaaggaacaaattgaaatggcaaagcaattagtgaatgacatagtcagtgagaaccgc
ctcagaaacccaccaatgagcggagggtatattcaacaagggtaccgtcccccacgccct
ccagcaaactggggcccacctggcccacctccaacacaacaacctggatatggctatcca
caaacaggggcttatcctacaccgccacctgcaccacagtttaatagcacccttcctcaa
cccccttactcaggttatcctcaacaagcgtcttctggttgggatcaacctccccctgct
ccttctcagccaacaccacagggcaccagttatgattactatggccaacagcaacaggca
cctccacctcaaggaacccaacaaagctcgatggataatacaaacagtactagcactacc
acttatggttataatcagcaacctcctcctgctaactatacacagcaaggatcatatgga
gaacccagttaccccaaccaacctgttgctcaaggttatggccagcaaagctatggtggt
agctatcaagcgccgagtaccactactcaaccgagctatggtcagcaaccaactaatcct
caacaagggtacacacaaagctatagtgctcctccaccctatgaagctggccccacacct
ccttcctcgtatgggcctcagaacccttcctctcagcaagcttcaggaccagtgggttat
aaccaagcaggtcctactggctatggtgcaccgccttcttctcagccttatgtgaaccct
cctccccaagctggctatgggcaagccggccctacatcagttcctcctacaaactatggg
cagaagccccctgtgcagcctctttatactggccagcctgcctctaccacccaaacaggc
tctattcagcctggttataatcctcaagtaggctctactcagcccggttatggtggccca
ccgccatcagctcctagctatgggcagcaatcctatggcgctcctgtggcttctcagcct
gcaccttatggtgccccgccaacctataatgatcagtatggtgcctattcgcagcctcca
gtgtatggttctgatgccgctcctgcagcgcaggcccccccggtgcaagctggagttgtc
cccaaggcgtcacctcagagctga
DBGET
integrated database retrieval system
