Amborella trichopoda: 18443830
Help
Entry
18443830 CDS
T02990
Name
(RefSeq) cellulose synthase-like protein D3
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
atr01003
]
18443830
Glycosyltransferases [BR:
atr01003
]
Polysaccharide
Structural polysaccharide
18443830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
zf-UDP
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
18443830
NCBI-ProteinID:
XP_006854073
UniProt:
U5D002
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MMNSSGSNSFKPSRSMRSNGDPELRAKPPLPPTVAFARRTSSGRYVSYSQDELDMSGDLS
SDYMSYTVHIPPTPDNQPMDPTISAKVEEQYVSNSLFTGGFNSVTRAHLMDKVIDSESSH
PQMAGAKGSSCAIEGCDCKVMSDERGEDILPCECNFKICRDCYLDAVKTGGVICPGCKEP
YKNGGDLEEVGLDSERPMHLPLPPAGGMSKMERRLSLMRSTKSILMKSQTGDFDHNRWLF
ETKGTYGYGNAFWPNDNDGTGESPSELTSKPWRPLTRKLKIPAAVLSPYRLLILVRMVAL
SFFLVWRIRHPNQDAIWLWGMSVVCELWFAFSWLLDQLPKLCPVNRATDLQVLKEKFEEP
GPHNPTGKSDLPGVDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYVSDDGGALL
TFEAMAEAASFADLWVPFCRKHNIEPRNPESYFNTKGDPTKNKVKPDFVKDRRRVKREYD
EFKVRINGLPDSIRRRSDAYHAREEIKAMKLQRQNGEEPSEAAKVPKATWMADGTHWPGT
WMVPGSEHSRGDHAGIIQVMLKPPSDDPLLGTADEKLLDFTGIDTRLPLLVYVSREKRPG
YDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSQAMCEGMCFMMDRGGDRICYVQ
FPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRMALYGFDPPRATVH
SGCCGRSRKVKVNSSTKKPEETQALRMGDSDDEDAQLNLSLLPKKFGNSTFLLDSIPVAE
FQGRPLADHPAVKNGRPPGALTFPRDLLDASTVAEAISAISCWYEDKTEWGQRVGWIYGS
VTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNA
LLASPRMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLDVMFLVYLLLI
TLTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTS
KSAGEDVDDEFADLYIVKWTSLMIAPITIMMTNLIAIAVGISRTIYSVIPQWSRLLGGVF
FSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGSSQIGGSFQF
P
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcatcgggttctaactcattcaaacccagtagatccatgcgatcgaatggt
gacccagagcttcgagcaaagccacctcttcccccgactgtggcctttgcaaggagaacc
tcaagtggtcgctatgtgagttactctcaagatgaactcgacatgtcaggggacctgagc
tcagactatatgagttatacggtccacataccaccgacccctgataatcagcccatggac
cccaccatctcggccaaggtggaggagcaatatgtatccaactccttgttcactggtggt
ttcaacagtgtgactagggctcacctcatggacaaggtgatcgattcagaatcaagccac
cctcaaatggctggagccaagggctcctcatgtgccattgaagggtgtgattgcaaggtc
atgagcgatgagagaggagaagacatactcccttgtgagtgcaacttcaagatatgcaga
gattgctatctagacgctgtaaagacaggcggggttatatgccctggttgcaaagagcct
tataagaatggaggtgacttagaagaagtgggtctagattcagagaggcctatgcatttg
cctcttccaccagctgggggaatgtcgaaaatggagaggaggttgtctttgatgagatct
acaaagtctattttgatgaagagccaaactggtgattttgatcataataggtggcttttt
gagaccaaggggacttacggttatggaaatgctttctggccgaatgataatgatgggact
ggagagtcaccatcagagctgactagtaagccatggaggcccctgactcgcaagcttaag
atacctgctgctgtgcttagtccttacaggcttctcatccttgttcgcatggtcgctctc
tccttcttccttgtgtggcgtatccgccacccaaaccaggatgccatttggctatggggc
atgtcagttgtttgtgagctgtggtttgccttctcctggctcctcgaccaactcccaaag
ctatgcccagtcaatcgagcaactgacctccaagtcctcaaagaaaaattcgaagaaccc
ggaccccataacccaactggaaaatctgacctaccaggtgttgatgtctttgtatcaact
gctgaccctgaaaaagaaccccctcttgtaactgcaaataccattctctctatccttgca
gctgattacccggttgaaaaacttgcttgttatgtatctgatgatggtggggctcttttg
acttttgaggccatggcagaggctgcgagctttgctgatttgtgggttcctttttgtcgt
aaacataatatagaaccgagaaatcccgagagttattttaatacgaaaggggacccaacg
aagaataaggtgaagccagattttgtgaaagataggaggagggttaagagggaatatgat
gagtttaaggtgaggattaatgggttgcctgactcgattaggaggaggtctgatgcttat
catgctagggaggagattaaggcaatgaagttgcagaggcagaatggggaggagccaagt
gaggctgcgaaggtgccaaaggctacgtggatggctgatgggacccactggcctgggact
tggatggttccggggtccgagcattcaagaggggatcatgctggaattatacaggttatg
ctgaagcccccaagtgacgacccattgctaggcactgctgacgagaagctcctcgacttc
acgggcatcgacacccgcctccccttgctcgtttatgtctcccgtgagaagcgccccggc
tatgatcacaacaagaaggctggtgccatgaacgctcttgtgcgtgcctccgccataatg
tccaacggccccttcatcctcaaccttgactgtgaccactacatctacaactcccaagcc
atgtgtgagggcatgtgcttcatgatggatcgcggaggtgatcgcatttgctatgttcag
ttcccacaaagatttgaaggtatcgacccatctgatcgatacgccaatcacaacaccgta
ttctttgatgtcaatatgcgtgcgcttgatggtctacaaggtcctgtctatgtgggcacg
ggctgcctctttagacgaatggctctttatgggttcgacccaccgagagcgacggtgcac
tcggggtgttgtggtcgctcaagaaaggtaaaggtgaattcatcgactaagaaacctgaa
gagacacaggcactgaggatgggtgactctgatgatgaggatgcacagttgaatctctct
ttgttgccgaaaaagtttggaaactctacattccttttggactctatcccagtcgccgag
ttccagggccggcctctagccgatcacccagcagtgaaaaatggtcgaccccctggtgcc
ctaaccttcccccgagacttgctcgatgcatcgactgtggctgaggccattagtgcgatc
tcatgttggtatgaagacaaaacagagtgggggcaaagggtgggttggatctatggttct
gtcactgaggatgtggtcacaggttaccgtatgcacaatcgtgggtggaagtcagtctat
tgtgtgaccaaacgtgatgcctttcgtggcactgctcccatcaacctcactgaccgtttg
caccaagtgcttcgttgggctactggatctgtcgagattttcttctctcgcaacaatgcg
cttctcgcaagcccaagaatgaagttcctgcaacgcattgcctatttgaacgtagggata
tacccatttacatcgatctttctcatcgtttactgcttccttccagctctctctctcttc
tcaggccaatttatcgttcaaactcttgatgtcatgttcctagtctacctcttgctcatc
acccttactctctgcatgctcgctgtgctagagatcaagtggtcaggtattgagctcgag
gagtggtggcgtaacgaacaattttggctcattgggggcactagtgctcacctagctgct
gtgttacaaggcttgttgaaggtcatagcagggatcgaaatctcttttaccctaacatcg
aaatcggcgggagaggatgtagatgatgagtttgcggacctttacatcgtgaagtggacc
tcacttatgatagcacccataactatcatgatgaccaacctcattgccatagcagtagga
attagccggactatatatagtgtcataccgcagtggagccggcttttgggtggtgtgttc
tttagcttttgggtgttggcgcatttgtacccattcgcgaaggggttaatggggcggagg
ggccgaacacctacaattgtttttgtgtggtctgggctcatagcaatcacaatctcactc
ttgtgggttgctataaatccaccagctgggagctcacagattggggggagtttccagttt
ccgtga
DBGET
integrated database retrieval system
