Amborella trichopoda: 18443919
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Entry
18443919 CDS
T02990
Name
(RefSeq) cell division cycle 20.1, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
atr
Amborella trichopoda
Pathway
atr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18443919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18443919
03036 Chromosome and associated proteins [BR:
atr03036
]
18443919
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
18443919
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
18443919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR19_1st
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
Ge1_WD40
WDR90_beta-prop_4th
RMC1_N
WDR54
Beta-prop_VPS8
L_PA-C-like
PDGLE
Motif
Other DBs
NCBI-GeneID:
18443919
NCBI-ProteinID:
XP_020529094
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MDAGSLSSSASMKQERRYPLHEQMVPRRPSSRQQYSDRFIPDRRAMDLDVARYMLMDSKK
ENTTPGSPSKEAYRKRLAEIVFQNRTRILAFKSKPPTLERAYEEVLSDKHQVRSAKTRRH
IPQXAERTLDAPELLDDYYLNLLDWSCGNVLAIALGNTVYLWDGSNGSTSELTTIDEENG
PVTSINWAPDGKHIAVGLNNSDVHLWDATSTKQLRTLRGGHRGRIPSLAWNSHILTTGGH
DGLIINNDVRIRSHIVETYRGHQQEVCGLKWSNSGKQLASGGNDNILHIWDQSLSNSSNS
PLHRLEDHLAAVKALAWCPFQSNLLASGGGGGDRCIKFWNTHTGACINSVDTGSQVCSLL
WSKNERELLSSHGFTQNQLTLWKYPSMVKLAELNGHTSRVLFMAQSPDGCTVASAGADET
LRFWQVFGAPELLNSKPEAKTSFGPFSNINQIR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggttctctctcttcgtctgcttcaatgaagcaagagaggcgttaccctctt
catgagcaaatggttccaagaagaccttcttcaaggcaacaatacagtgatagattcatc
ccagatagaagagcaatggaccttgacgttgctcggtatatgctcatggattcaaagaaa
gagaataccacccctggttcaccatcaaaagaggcttataggaagcgtctcgccgagatt
gtattccaaaatagaacaagaatccttgcttttaagagcaagcccccaacccttgagaga
gcttatgaggaagttctctcagataagcatcaagtgcgttcagccaagactcgaagacat
attcctcagnccgctgagaggacccttgatgccccagagttgttggatgattactatttg
aatctgttggattggagttgtggcaatgtgttggccattgcccttgggaacacagtttat
ctatgggatggttcaaatggatctacttctgagctaacaaccattgatgaagaaaatggc
cctgttacctctatcaattgggcacctgatgggaagcatatagctgttggattgaacaat
tctgatgtccatctctgggatgcaacttcgactaaacagctacgaactctaagaggtggt
caccgtgggcgaattccctctcttgcatggaattctcatattctcactactggtggccat
gacggcctcattatcaacaacgatgtgagaattcgatcacacattgtggaaacttacaga
ggccaccaacaagaagtttgtggcctcaaatggtctaattcaggcaaacaactagcaagt
ggaggaaatgacaatatcctccatatttgggatcaaagcttatctaattccagcaactca
ccgctgcatagattagaggaccatttggcggcagttaaggcattggcttggtgcccattt
cagagcaatttattggcttcaggtggaggtgggggtgataggtgtatcaaattttggaat
acacatactggagcttgcataaattcagtggatacagggtctcaagtgtgttcattgctt
tggagtaagaatgagagagagttgttgagctctcatgggtttactcagaaccaattgaca
ctctggaagtatccatctatggtgaagttggctgagcttaatgggcatacttctagagtt
ctattcatggcccagagcccagatgggtgtacagtggcctcagctggagctgatgagaca
ttgagattttggcaagtttttggagctcctgaactcctcaacagcaagcctgaagctaag
acctcatttggcccattcagcaatatcaaccaaatcagatga
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