Amborella trichopoda: 18443985
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Entry
18443985 CDS
T02990
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18443985
Enzymes [BR:
atr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
18443985
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
18443985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
RQC
ResIII
Hormone_6
Motif
Other DBs
NCBI-GeneID:
18443985
NCBI-ProteinID:
XP_020529018
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MEDDILAELLNVEEELEEVQGQIRVLISRQDKLYEKQSELKALLEACQGSESPSNAKVSA
PVENWAGSFEWDKEVDDIRFNVFGISEYRVNQCEIINAVMSGRDVLVIMAAGGGKSLCYQ
LPAILRNGVALVVSPLLSLIQDQVMGLSALGIPASMLTSNTSKEDEKMIYKALEKGEGEL
KILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQ
FPSVPMIALTATATQRVQTDLMEMLHISKCVKFVSTVNRPNLFYEVREKSSAAKVVIDEV
TDFICGSYPNKESGIVYCFTRKECEQVAKELRERGILADHYHADMDANERERVHLRWSNN
RIQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPADCLLFFRPGDV
PRQSSMVFYENSGLQNLYDIVRFCQSKRSCRRNAFFHHFGEPLQDCNGMCDNCAHPTETK
EVDASTQAKIIVSLLKEMQENDQRATMLQLVDKLKVNSRGSGGATPTIPDLKREELEQLI
VQLVLDRVLKEEFQHTAYSTNAYVTIGPLWKQLVQGKKMVKLEISVNSRGSRTNIKAVKC
KHLAGLELKLDDFRKELSSCHGGIFPHAVLSTQQISTLSTERPDSLEQLEKLIGKTKTEK
YGERILDCIRQYVETEVPNGSVKEGDSIQHRPTKRAKTKKALINIDTSEDEQC
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacatcttagcagagctgctaaatgtagaggaagagttagaggaggttcaa
ggccaaataagggtgctgattagtcggcaggacaagttgtatgagaaacaatcagagttg
aaggcattattagaagcatgtcaaggttctgagagcccttccaatgccaaggtatcagcc
cctgtggaaaattgggcaggttcatttgagtgggacaaggaagtggatgatatccgtttc
aatgtatttgggatatctgagtaccgtgtaaaccaatgcgagattattaatgcagtcatg
agtgggagagacgttcttgtgataatggctgcagggggtggtaaaagcctttgttaccaa
cttccagccattcttcgcaatggagtggcacttgtagtcagtcctctgctatcccttatt
caagatcaggtaatggggctgtctgctttaggcatcccagctagcatgcttacttcaaat
actagcaaagaagatgaaaagatgatatataaggcccttgagaaaggtgagggagagctg
aagattttgtatgttacaccagagaagatatcaaagagcaaaaggttcatgtctaagctt
gaaaaatgccatcatgctggccggctttctcttatctcaattgatgaggcacattgctgc
agtcaatgggggcatgacttccgtcctgattacaagaatctcagcattttaaagactcag
tttcccagtgttccaatgattgctctgactgcaactgccactcaaagggtccaaactgac
ctaatggagatgttgcatatttcaaaatgtgttaagtttgtgagcacagtgaacagaccc
aatcttttctatgaggtaagagaaaagtcatctgctgcaaaggtggtcattgatgaagtc
acagattttatatgtggctcttatccaaataaggaatctggaatagtttattgtttcact
cgaaaggagtgtgagcaggttgccaaggaattacgcgaacgggggatattggctgatcat
tatcatgcagatatggatgctaatgagcgtgaacgtgtccatctacgttggagcaataac
cgtattcaggtcattgtgggcacggtggcatttggtatgggaatcaacaaaccggatgtt
aggtttgtcattcatcatagcttaagcaaatctatggagacatattaccaggaaagtggc
cgagctggacgtgatggccttcctgcagattgtttattgtttttcaggcctggcgatgtt
cccaggcagagctcaatggtcttttatgagaactcaggattgcaaaatctctatgatata
gtccgtttttgccagtctaaaagaagctgccggcggaatgctttctttcaccattttgga
gagcctttacaagattgcaatgggatgtgtgacaactgtgctcatccaactgagactaag
gaagtggatgcctctacccaagcaaaaatcattgtctcattactgaaggagatgcaagag
aatgaccaaagggctaccatgttgcaattggtggataagttgaaggtcaactctaggggt
tcaggtggtgcaactcctacaattcctgatctaaagagagaggaactggagcaactgatt
gtgcagcttgttttagatcgagttttgaaagaagaatttcagcatacagcctattccaca
aatgcctatgttactattggacctctgtggaagcaattagtacaagggaaaaagatggtt
aagcttgaaatttctgtcaactcaagaggaagtagaacaaatataaaagcggtgaaatgc
aaacacttggctggcctcgaattaaagcttgacgattttcggaaggagctctcttcatgt
catggaggaatatttcctcatgcggttttgtccacgcaacaaattagcacgctcagcact
gagaggccagattccttagagcagttggagaagcttattggaaagacgaagacagagaaa
tatggtgaaaggattcttgattgtatccgacagtatgtagaaacagaggtacccaatggc
tctgtaaaggaaggggacagtatccaacacagaccgaccaagagagcaaagaccaagaag
gctctcattaatatcgatactagcgaagacgaacaatgttga
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