KEGG   Amborella trichopoda: 18444008
Entry
18444008          CDS       T02990                                 
Name
(RefSeq) protein PIR
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18444008
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     18444008
   Factors involved in mRNA localization
    Other mRNA localization factors
     18444008
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd WASH-4_N COG2_N
Other DBs
NCBI-GeneID: 18444008
NCBI-ProteinID: XP_006854249
LinkDB
Position
Unknown
AA seq 1298 aa
MAVPVEEAISALSTFSLEDDQPDVQGLAVQLSAERYATSSPIEYADVAAYRLSLVEDTKA
INQLNSLIQEGKEMSSVLYTYRSCVKALPQLPDSMKQSQAELYSETYQVLDLEMSRLREI
QRWQALAASKLAVDMQRFSRPERRINGPTITHLWSMLKLLDVLLNLDHLKNAKASIPNDF
SWYKRTFTQVSVQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
YCVESLESDFALLFPEHYCLLRVLPVLVVLASSSEKDGDSLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAMLKELSGYFQKFSSQSRLLSLPAPHEIGPRETQDYQRRYLIINHIGTI
RLEHDDHAIRFASAMNQVILMKSTDGADSEWCKEVKGNLYDIIVEGFQLLSRWTGRIWEQ
CAWKFSHPYRNADSQEPREISAAFSDYEKVVRWNYMVEERKALVEVVSYIKSIGSMLHQY
DTVVADALWETIHAEVQDFVQNKLAAMLRTTSRKKKDLSRILSDMRTLSADWMANTGKSD
SGPQSLQQGGEGSNGNTFHPRAVAPTTAQVHCLQFLIYELVSGGNLRKSGGVFGNSGSEV
MPNDLKQLETFFYKLSFFLHILDYTVTLETLTDLGFLWFREFYLESSRVIQFPIECSLPW
MLADYVIETEDGGLIESVLIPFDIYNDAAQHALVVLRQRFLYDEIEAEVDLCFDQLVFKL
SESIFAYYKSHAASKLLDPAFVFASDNADKYSLPSLRYDALLKMKRVKLLGRSVDLRSLI
AQRMNKAFRKNIAFLFDRFDSQDICAVVELQQLLDVLRLTHRLLSEYLTIDPFTPILMEM
QENVSLASFSGRLASQVFTEMQNDLLPNFILCNTTQRFVRSPKMLHQPIQKSSVPQGKPS
FYCGSQELNVAYHSFAQLYSKFFGLPHIFAILKLLGSRSIPWLIRALLDLLTVKVNSLES
KIMVLQESFPKSIGLVPFDGGVAGSLRVIHEQLHWASTSEFKVEILHCLKEIGSILFCMG
LFDIVLREVETTQFLQIAPWLGLVPGNEGQVQQDLKENGNSPIISLFKSATTVIATLPSC
PSPSSFLTMSKQAEAADVFYKNNLHSGSVLEYSLAYTSAALDRLRSKWSSNPKTGFIDIT
TSKDFYRIYGGLQFVCMEESLQDASRKHECLGDSVAWGGCSIIYLLGQQLHFELFDFSYQ
LLNVAEVENTSSGQSMSSDRTKNTHYPQGWENLIEGAKKVRRLNNHVFSMLKARCPFEDK
TACAIKPSGAPLPRVKYENTVSAFETLPQKAKISSSFG
NT seq 3897 nt   +upstreamnt  +downstreamnt
atggctgttccagttgaggaggccatttcagctctttctaccttttctttagaggatgat
caaccagatgtacaagggttggctgttcaactgtctgctgaaagatatgctacaagtagt
ccaattgagtatgctgatgtagctgcatatcgtttgtcattagtggaagacacaaaagcc
attaatcaactgaactccctgattcaagagggaaaggaaatgtcatctgtgctttataca
taccgaagttgcgtcaaagctttacctcagttgccagattctatgaaacaaagccaagca
gaattgtactcggagacttatcaggtcctggacttggagatgagtcgtttgcgagaaatt
cagcgttggcaggctttggcagcatctaaattagcagtggacatgcagcgattttcgagg
ccagagaggcgcattaatggtcctacaattactcatctctggtccatgcttaagttgcta
gatgttttactaaacctcgatcatctcaaaaatgccaaagcaagcatacctaatgatttt
tcatggtacaagaggacatttacccaagtcagtgttcagtggcaggatactgattccatg
agagaggagttagatgatttgcagatatttttaagcacgagatgggccatactactaaac
ttacatgtggagatgttccgcgtcaacaatgtggaggatatccttcaagttcttatagtt
tactgtgtagagtctttggaatccgatttcgcacttttgtttccggagcattactgtctt
ctgcgagttttacctgttcttgttgttttagcatcatcgtctgaaaaggatggggattcc
ttatataagagggttaaaattaatcgcctaattaatatattcaagaacgaccctgttatc
cctgcatttcccgatcttcacctttctcccgctgcaatgttaaaagagctttctgggtac
ttccaaaaattttcaagccaaagtcgccttttatcacttcctgcaccgcatgagattgga
ccccgagagacacaagactaccagaggcgttatttaatcatcaaccacattggaactatc
cgtttggagcacgacgatcatgcgatacgttttgcctcagccatgaatcaggttatatta
atgaagtcaacagatggtgccgattctgaatggtgcaaggaggtcaagggaaatctgtat
gatataattgtagaagggtttcaacttctcagtagatggactggacgaatatgggaacag
tgtgcatggaaattttctcacccatacagaaatgctgattcccaagaaccacgtgaaatt
tcagcggctttctctgattatgaaaaagtcgttcgatggaactatatggtggaggagagg
aaggcattggttgaggtagtgagttatataaagagcataggttcaatgctgcatcaatat
gatacagttgtggcagatgctctatgggaaaccattcatgctgaagtccaagattttgta
cagaacaaattagcggccatgctgcgaacaacatcccgaaagaagaaagacttgtccagg
attttgtcagacatgaggacactttcagcagattggatggcgaatactggcaagtcggac
tctggacctcaatccttgcaacaggggggtgaaggttccaatgggaacacttttcatcca
agagcagtggcaccaactactgcccaggtgcattgcctccaatttttaatttatgagctc
gtttctggtggtaatctgagaaaatcaggaggcgtatttggaaacagtggctcagaggtt
atgcctaatgatttgaagcagttggagacctttttttacaagctcagctttttcctccat
attctggactatacagttacacttgaaacattgacggatcttggttttctctggttccgg
gaattttatttggagtcctctcgggttatccagtttccaatagaatgttctcttccctgg
atgctggcggactatgtaattgaaactgaagatggagggcttatagagagtgttttgatt
ccatttgatatttataatgatgctgcacaacatgcattagttgtcttgagacaacgcttt
ctgtatgatgagatagaagctgaggtggatctttgttttgatcaacttgttttcaagcta
agtgagagtatttttgcatactataagagccatgctgcgagcaaattgcttgatccagca
tttgtgtttgcttcggataatgctgataaatattctctcccatcactccgatatgatgct
ttactcaaaatgaaaagggtgaagctattgggaagaagtgtcgatttgagaagtttaatt
gcgcaacggatgaataaagcatttcgaaagaacattgcattcctatttgatcgcttcgat
tcacaagatatttgtgctgtggtggaactgcaacaactcctagatgttttacgactcact
catcgccttctttctgaatatctcactatagacccattcacaccaatattgatggagatg
caagaaaatgtttcccttgcttcattttctggtcgattggcttctcaggtgttcacagag
atgcagaatgacctcttgcccaattttattctttgtaatacaactcagcggtttgttcgt
tccccaaaaatgctccaccaacccattcaaaagtcatctgtccctcagggaaagcctagt
ttctattgtggttctcaagagttgaatgttgcataccatagttttgcgcagctatacagc
aagttttttggactacctcacatatttgctatacttaaacttctgggatctagatcaatc
ccatggcttattagagctttgcttgatcttctaacagtcaaggtgaactcactggaatca
aagattatggtattgcaagaatcatttccgaagtcaattggattggtgccatttgatggt
ggcgttgcaggttctttgagagttatccatgaacaattacattgggcatcaacatcggaa
ttcaaagttgaaattctccattgtttgaaggagattgggagcatacttttctgcatgggc
ctttttgacattgttctgagagaagttgagacaacccagttcttgcagatcgctccatgg
ttgggtttggttcctggaaatgaaggacaagtgcagcaagatctaaaggaaaatggcaat
agccctatcatcagcctctttaaatctgcaactactgtgattgcaacattaccaagttgt
ccaagtccatcatctttcttgaccatgtcaaagcaagcagaagctgctgatgtattttac
aagaacaacctgcattcaggaagtgtgcttgaatattctcttgcgtatacaagtgcggca
ttggacaggctccgcagcaaatggagctctaatcccaagactggcttcattgacatcaca
acctcaaaggatttctaccgaatttacggcggccttcaatttgtatgtatggaagagtcc
cttcaagatgcctcaagaaagcatgaatgcttaggggattctgtggcttggggtggctgt
tcaattatatacttgcttggtcaacagctgcactttgaactttttgatttttcctatcaa
cttcttaatgtagcagaggtggaaaatacaagcagtggtcaatccatgtcttcagataga
accaagaatacccactatccccaggggtgggagaacttgatagaaggtgcaaagaaagtg
agaagattgaacaaccatgttttctcaatgttgaaagctcgttgcccatttgaggacaag
acagcatgtgcaattaaacctagtggtgcccctctccctcgggtcaagtacgaaaacact
gtttcagcattcgagacactaccacagaaagccaaaatttcctcatcttttggttga

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