Amborella trichopoda: 18444106
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Entry
18444106 CDS
T02990
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atr03036
]
18444106
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
atr04812
]
18444106
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
18444106
Cytoskeleton proteins [BR:
atr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
18444106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
TOR1L1_N
HEAT_EZ
HEAT_2
Vac14_Fab1_bd
PDS5
INTS1_R4
Cnd1
Adaptin_N
HEAT_Maestro
UTP20
Sec7-like_HUS
Tti2
MMS19_C
Rif1_N
ParcG
MMS19_N
HEAT_DAAF5
INTS7_N
V-ATPase_H_N
TPR_TTI1_C
Dopey_N
VBS_C3G9
KptA_kDCL
CRM1_C
Motif
Other DBs
NCBI-GeneID:
18444106
NCBI-ProteinID:
XP_006854346
UniProt:
U5D627
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MEEALEMAQAKDTKERMAGVELLQQHLENCRKPLPAAQVTQLVDCCMDLLKDNNFRVSQG
ALQALTSAAVLSGEHLKLHFNALLPAAVERLGDAKQPVRDAARRLLIALMQVSSPTIIVE
RAGSYGWTHKSWRVREEFARTVSSAIHLFAATELPFQRVLLAPVLQLLNDSNNTVREAAA
SCIEEMYMQVGPQFRDELQRHHLPSSMVKEINARLEKLEPKVRASDGRTTQFGSAEMKPA
VVPTFSQKKSSPKTKSVARETSVFGGESDVAERPMDPVKVYSEKELVREFEKIASTLVPE
QDWSVRIAAMQRVEGLVFGGATDYPSFTTLLKQLVGPLSIQLSDRRSSIVKQACHLLCLL
SKELLGDFEACAEVFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADFAKH
DRSAVLRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCVADAMSEVRSTARTCYRMF
TKTWPERSRRLFLSFDPVIQRIINEEDGGIHRRYASPSLRERGVQQLRVPSQPPALSNLP
GYGTSAIVAMDRSASIAASGPSLSSGSALVSQMKPQGKGTERSLESVLQASKQQVSAIES
MLRGLDISEKQNSLSTSCPSSLDLGVDPPSARDPPLPAAVPASNHLTHGSGFSNSAGANI
AKGSIRNGTPGLTDLTSQLPASKEHNKLSYLSNLASDPLSTLSYTAKRVPISSERSLEIS
TFEDNVDIRPTRRISKSDMYTDRHFLETSYRDVGSRDSQNHHIPNFQRPLLRKHVAGRAS
ASGRASFDDGQFPIGEMSHYTDGPTSLIEALTEGLSPSSDWNARVSAFNYVRSLLQQGAK
GTQEILQSFEKVMKLFFQHLDDPHHKVAQAALSTLAELVPACRKPFESYLERILPHVFSR
LIDPKELVRQPCSTALEIVGNTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFDKLM
NSSEGAANSGMLKLWLAKVAPLVNDKNPKLKEAAITSIISVYSHYDSISVLNFILGLSVE
EQNALRRALKQYTPRIEVDLMNFLQMKKERTRSKSYYDQQDVVGTSSEEGYVVSSKKSHF
FGRYSSGSIDSDGGRKWSSMQESIQIGASIAQTASDEPQDQYYPNFEAGSNTEDVLLSLR
NKDSKNSVNASIQRTGSWGEHLVSENVNRSLEFENSIGTPRLVDLGYVNSDGKGALGDKL
DSEVHPDGDQNHEKAIVLKINCVPESGPSIPQVLHQICNGNDEESSVRKNEALQLLLQVS
RQNNPSVWTKYFNQILTAVLEILDDPDSSIRELALSLIVEMLNNQKETMEDSVEIVLEKL
LHATRDVVPKVSSEADHCLTIVLSQYDSFRCLTVVVPLLVSEDEKMLVTCINCLTKLVGR
LSQEELMGQLPSFLPALFDAFGNQSADVRKTVVFCLVDIYIVLGKAFLPYLGGLSSTQLR
LVTIYANRISQARTGTAIDGNQV
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcgctggagatggcgcaggcgaaggatacgaaggagcggatggcaggggtg
gagctcctccagcagcatctcgagaactgccggaagcccctgccagcggcacaagtgacc
caattggtggactgctgcatggatctgctcaaagacaacaactttagggtttcccagggc
gcactccaggccctcacctccgctgctgtcctctcgggcgaacatttgaagctccatttc
aatgccctcctgccggcagccgtcgagagacttggtgatgcaaagcagcctgtaagggat
gcagctcgccgcctcctcattgctcttatgcaggtatcttcacccacaatcattgttgaa
agagctgggagttatggttggactcataagagttggagggttcgtgaagaatttgcacgg
acagtctcatccgcaatccatctttttgcagcaactgagcttccatttcaacgggtttta
cttgctccagtgctgcaattgttgaatgactcaaataatactgtgagagaagcagctgca
tcatgtattgaggagatgtatatgcaggtgggaccacaatttcgtgatgaattgcagcgg
catcatcttccatcctcaatggtgaaagagataaatgccagactggagaagctagaacct
aaggttcgtgcgtcggatgggcgtacaacgcaatttggttctgctgaaatgaagcctgca
gttgttcctacatttagccagaaaaaaagcagtccgaaaaccaagagtgttgcacgtgaa
acatctgtctttggaggtgagagtgatgttgcagagagacctatggacccagtaaaagtg
tattctgagaaggaattggttagagaatttgagaagattgcttccacacttgtaccagaa
caagattggtcagtcaggatagctgccatgcagagagttgaaggccttgtttttggaggt
gccacagactatccatctttcactacgttgttgaagcagttggtcggtcccttgagcatt
cagctttcagatcgacgttcaagcattgtgaaacaggcttgccatttgttatgcttatta
tcaaaggagcttttgggagattttgaggcttgcgcggaggtgtttatcccggtgcttttt
aagcttgttgtgataacagtacttgtaattgcggagtctgcagacaattgcattaaaacg
atgttgcgtaattgtaaagttgcacgtgtacttccacgaattgctgattttgcgaagcat
gaccgaagtgcagtcctccgtgccaggtgctgtgaatatgcactattaattcttgaatac
tgggctgacgcacctgaaatacagcggtcagctgacctttatgaagatcttataaaatgt
tgtgttgcagatgctatgagtgaggtacgttcaactgcaagaacctgctacaggatgttc
acaaaaacttggcctgagcgttctcgacgcctgtttttaagctttgatcctgtcatccag
aggataataaatgaggaagatgggggcatccacagaagatatgcttctccttctctccga
gagaggggtgtgcagcaactgcgagttccatctcagcctcctgccttatctaatttgcct
ggatatggaacttctgctattgttgcaatggatagaagtgcatcaatagctgcatctggg
ccctctctttcgtctggtagtgcgcttgtctcgcagatgaaacctcagggtaagggtact
gaaagaagccttgagagtgttctgcaggcaagcaaacaacaggtctccgccattgaaagc
atgctgagaggtctagatatctctgagaaacaaaattctctgtcgacctcatgcccttct
agtttggatctaggagttgaccctccatcagctcgtgatccacctcttcctgctgctgtc
cctgctagcaatcatctcacccatggttctggattttccaattcagctggagctaacatt
gccaaaggtagcattagaaatggaaccccaggtctaactgatttgacatctcaacttcct
gcctccaaagaacataacaagttatcatatttaagtaatctggcatcggatcccttgtcc
actctatcttacactgcaaagagagttcctatctcttctgagagatctctagagatcagt
acttttgaagacaatgtcgacattcgaccaactaggcgtatttcaaagtcagacatgtac
actgataggcatttccttgaaacatcttaccgagacgttggttctagggattcacagaac
catcatatccccaatttccagaggccccttctaagaaaacatgtagctgggagagcttca
gcgagtggaagagccagttttgatgatggtcagttcccaataggggagatgtctcactat
acagatggtccaacttcactcattgaagccctgactgaaggtctgagccctagctctgat
tggaatgctagggtttctgcttttaattatgttcggtcattgcttcaacaaggagcaaaa
ggcacacaagagatcttacagagttttgaaaaggttatgaagctgttcttccaacatctg
gatgatccccatcacaaagtggctcaggctgctctttctacacttgcagagcttgtccct
gcttgtagaaaaccatttgaaagttacctcgagaggattttaccccatgttttttctagg
ctaattgacccaaaggagcttgttaggcaaccttgttcaacagcattggaaattgttggt
aacacatatagcattgattctttgcttcctgctttacttcgttcacttgatgagcagcgc
tcccccaaggctaagttggctgtaattgagtttgccattagttcttttgataaacttatg
aatagttcggaaggtgctgccaatagtggaatgctgaagttatggcttgccaaggtggca
cctttggtcaatgataagaaccctaaacttaaggaggctgctattacaagcattatttcg
gtttattctcactacgattccatttctgttctgaactttatccttgggttatctgttgaa
gaacagaatgctttgaggcgagcccttaaacagtatacacctcgtattgaggttgatctc
atgaatttcctgcaaatgaagaaagagcgtactcgttcaaaatcatattatgaccaacaa
gatgttgttggtacgtcctctgaagaaggatatgtggtgtcttcaaagaaaagtcatttc
tttggtaggtattcttcagggtctattgacagtgatggaggaaggaagtggagttcaatg
caggaatccatacagataggagcctcaattgctcagacagcctctgatgaaccgcaagac
cagtactatccaaattttgaggctggatcaaacactgaagacgtgcttttgagtttacga
aacaaggattctaaaaacagtgttaatgcttctatacaaaggacgggttcatggggtgag
catctagtttctgaaaatgtcaatcgcagtttagagtttgagaattctataggaacacca
cgccttgttgatctcggatatgtaaactcagacggaaaaggagctttaggggacaagctt
gacagtgaagttcatcctgatggtgaccagaatcacgagaaggcaattgtactgaaaatc
aattgtgtaccagaatctggccctagcattcctcaagttctacaccagatttgcaatggg
aatgatgaagaatcatctgtaagaaaaaatgaggctcttcaactattacttcaagtttcc
cggcagaacaatccttctgtgtggaccaagtacttcaatcagatattgacagccgtactt
gagattttagacgatcccgattcatctatcagggagctggcgctttctttgatagttgaa
atgctcaacaatcagaaagaaaccatggaggattctgttgagatcgtcctcgaaaaacta
cttcacgccaccagggatgtggttccaaaggtttcatcggaagctgatcactgtttgaca
atcgttttatcacaatacgattcatttagatgccttacggtcgtcgtacctttattagtc
agtgaagatgagaaaatgctggttacttgtatcaactgtttgacaaagcttgtggggcgt
ctttcacaagaggaactgatgggtcagttaccttcatttttacctgcgctgtttgatgcg
tttggaaaccagagtgctgatgttcggaagactgtcgtattctgcttggttgacatttat
atcgtgctgggaaaagctttcctgccatatttgggtgggcttagtagcactcagctgcgc
ttagttaccatctatgcgaatcgcatatcacaggcgagaacaggtacagcaatagatgga
aatcaagtttag
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integrated database retrieval system
