KEGG   Amborella trichopoda: 18444157
Entry
18444157          CDS       T02990                                 
Name
(RefSeq) probable pectate lyase 15
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
atr  Amborella trichopoda
Pathway
atr00040  Pentose and glucuronate interconversions
atr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:atr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    18444157
Enzymes [BR:atr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     18444157
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD Defensin_propep
Other DBs
NCBI-GeneID: 18444157
NCBI-ProteinID: XP_011627089
LinkDB
Position
Unknown
AA seq 405 aa
MARFLLLLLFALHIRAKPLAARAEAFQDAEAVASMVERSIWNSSRRALGYLDCGTGNPID
DCWRCDPDWALHRKRLADCTIGFGKDAIGGRDGRYYTVVDPSDEDPITPKPGTLRYAVIQ
DEPLWIMFQRDMVIQLKQELIVNNFKTIDGRGASVHIADGACITIQYVSHVIIHGLHIHG
CKPTGNAMVRSSPRHYGWRTMADGDGVSIFGSSHVWVDHCSLSDCADGLVDAIMGSTAIT
ISNNQFNHHDKVMLLGHSDSYELDKGMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSASPTINSQGNRYLAPTNPFAKEVTKRVDTLSGVWKDWNWRSDRDMMLNGA
FFTPSGTGASTVYAKASSLGAKSSSMVASMTSNAGALFCKKAHPC
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggcgagattccttcttctcctgctctttgcccttcacataagggccaaaccgttagcc
gctagagcagaggctttccaggatgctgaagctgtggcatcaatggtggagaggagcatc
tggaacagctcgagaagggcgctaggctacctcgattgtggcacaggcaaccccattgac
gattgctggcgctgtgacccggattgggccctccaccgtaagcgactcgccgattgcact
atcggcttcggaaaggatgcaatcggggggcgagacggccgctattacacagtcgtggac
cccagcgatgaagaccccatcacacccaagccgggcaccctgcgctatgcagttatccag
gatgagcccctctggatcatgttccagagggacatggtcatccagcttaagcaagaactc
atagttaataacttcaagaccattgatggtcgtggagctagtgtccatatagctgatggt
gcatgcattaccatccaatatgtgagccatgtcatcatacatgggttgcacatacatggc
tgcaagcctactgggaatgccatggtgaggagctcgccgagacattatggatggaggaca
atggcagatggggatggagtgtcgatatttgggtcgagccatgtatgggtcgatcattgc
tcgctgtccgattgtgcggatgggcttgtggatgcgatcatgggatccacggcgatcacc
atctccaataatcaattcaaccatcatgataaggtgatgttgctaggtcatagtgattct
tacgagttggacaaaggcatgcaagtgaccattgcctttaaccattttggagaaggcctg
gtccaaagaatgccaaggtgtagacatgggtattttcatgtggtgaacaatgactacaca
cattgggagatgtacgccattggtgggagcgcatcccccaccattaatagccagggcaac
agatatcttgcacctactaacccatttgctaaagaggtcactaagagggtggatacttta
agtggcgtttggaaagactggaattggagatcggacagggatatgatgttgaatggggca
ttcttcacaccctcgggcactggagcatccactgtctatgccaaggcttccagtctaggg
gccaagtcttcatccatggtggcctctatgacttccaatgctggcgctctcttctgcaaa
aaggcccacccttgctaa

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