Amborella trichopoda: 18444161
Help
Entry
18444161 CDS
T02990
Name
(RefSeq) transcription initiation factor IIE subunit alpha isoform X1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
atr
Amborella trichopoda
Pathway
atr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18444161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18444161
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
18444161
Prokaryotic type
Archaeal type
TFE
18444161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_8
A24_N_bact
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
18444161
NCBI-ProteinID:
XP_006854401
UniProt:
U5D683
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MSGADSFKRLVKLAARAFYDDISTKGDNQPKTGRSDNRGMAVVVLDALTRRQWVKEEDLA
KDLKLHSKQLRRTLRFFEEEKLVMRDHRRETAKGAKVYNAALAATGDGQLNGNSEEKMKM
HTHSYCCLDYAQIYDIVRYRIHRMKKKLKDDMEDKNTIQKYECPNCKRKYSALDALQLIS
MHDESFHCENCNAELVAESDKKAAEEMGDGDDNARRRMREKLRDQLQRIEVELKPLMDQL
ARVKDLPAPEFGTLQAWEARAIAAGRAANGDSALNDSSRAAQGQGYGGTPMPFLGETRVE
VALSGVEEKEEDLKPDYAATVRKVLPPWMIKQGMNLTNEQRGEVKQEIKTENASIAHPLE
EKKPKEGEKQNAQTNIQEEYLKAYYAAILKRQQEEQAAAAYSVASTSNVMNGVSETQTER
RVGMKVKREYNEDEDDVEWEDATPSGVSSVAPKINDLNEEADAPKEEDDEDEIDWEEG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgctgattcctttaaaaggctggtgaagctcgcagctcgagctttttatgat
gacattagtactaagggtgataaccagccaaagaccggcagaagtgacaatagaggcatg
gctgttgttgttcttgatgctttgaccaggcgccaatgggtcaaagaagaagacttagca
aaggatctgaagctgcactcaaaacaacttcgtcgtactttacggttttttgaggaagag
aagttagtcatgagggatcatcgtagagagacagcaaaaggtgcaaaagtttacaatgcc
gcgcttgctgctacaggtgatggccagctaaatgggaacagcgaagaaaagatgaagatg
catacccactcatactgctgtttagactatgctcagatatatgacattgtgaggtacaga
attcatcgcatgaaaaaaaagcttaaagatgatatggaggacaagaataccatccagaaa
tatgaatgtcctaattgtaagcgaaagtattcagctttggatgcactgcagttgataagc
atgcacgacgaaagtttccattgtgaaaattgcaatgctgaacttgtcgctgagagcgac
aagaaagctgctgaggaaatgggtgatggagatgacaatgcaaggcggaggatgcgggaa
aaattgagggatcaacttcaaagaattgaggttgagctgaagccattgatggatcagttg
gcaagagtgaaagacctgcctgctcctgaatttggaactcttcaagcttgggaagcaagg
gctattgcagcaggtcgtgcggctaatggtgattcggctcttaatgactcatcaagagct
gctcaagggcagggatatggtggaactccaatgccgtttcttggggaaaccagggttgag
gttgctttatctggtgtagaagaaaaggaagaggatttaaagcctgattatgcggccact
gtgcgcaaggttcttcctccttggatgataaagcaaggaatgaacctcacaaatgagcag
cggggggaagtcaagcaagaaataaaaacagagaacgcttcaattgctcatccattggaa
gagaaaaagccaaaagagggggagaaacaaaacgctcagacaaatatacaggaagagtat
cttaaggcatattatgccgcgatcttaaaaaggcagcaagaggagcaagctgctgctgct
tacagtgtggcctccacttccaatgtcatgaatggtgtttctgaaacacagactgagcgc
cgggttggcatgaaggtgaaacgggagtacaatgaagatgaagatgatgtagaatgggaa
gatgctacaccttcaggggtttcctctgtagctcccaaaataaatgatctaaatgaggaa
gccgatgcacccaaggaggaggatgatgaagatgagatagactgggaggagggctaa
DBGET
integrated database retrieval system
