Amborella trichopoda: 18444171
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Entry
18444171 CDS
T02990
Name
(RefSeq) protein CHROMATIN REMODELING 20
KO
K10779
transcriptional regulator ATRX
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18444171
03036 Chromosome and associated proteins [BR:
atr03036
]
18444171
Transcription factors [BR:
atr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
18444171
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
18444171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
18444171
NCBI-ProteinID:
XP_006854411
UniProt:
U5D694
LinkDB
All DBs
Position
Unknown
AA seq
1585 aa
AA seq
DB search
MNEKEGEYKELEDSVTREEQKELGNSKIDEGQKEIEEYENGNERKELEDHEDGKEENEFD
DGEGANDLEGYDIGRKQQELRDYKIIDGHKQLEGNENGNGWKQSDDSTIDKEQKDVEDSE
IVNEEEELEDLENGKEHEELEDSEIGTDSFVEDSDDDEPFISENESDLDVEAPLTDAEIE
ELINEFLEVESKAAEAQESLEKESLAQVENEVRFELSEKFRGDDLEKAVSDEMETYKGEW
ERLLDDLETQSALLLEQLDGAGVELPSLYKWVESQAPEGCSTEAWRKRIQWAGSQLTNEI
AESISGAENYLQACRPVRRHHGKLLEEGASGFLSRKLATNDNKDSLNENAEKDWNSVNEI
LHSHNLPGESNSFGSKSYASVYLASTPLQAANMGLNFPGVDEVEEIDDIENCSRDPFYAD
AVANEDETGLTDEQKKKIRKVKEEEDAIFTLRLQNRLKQRRHRTHKTNQDTLLKETGSGV
HNDFRVCVPSGECSAKDTDSAELHGEKMAVEGVPSVSAIPASILSKRSHDSGNHEIDTKR
SRTVIIDSDDEMDVVEQTTSTNVLNPSINPSKVSEHYRCSACSDILNASKVCRHPLLGVI
ICENCKLVINRRSPRKDPDCSECYCGWCGKVDDLIGCRLCAMLFCARCIGRNFSKEKLER
VRSCGWECCCCAPDQLEQLVLECDNALRVSDNVASSSGSDSDLPQSVVDIQLSYKKKLKK
WTRRILDDTELGEETKQKIAIEKERQEHLKSLQEQFAFKTLGKSAATCNGNAADFAGEKV
LGDAVKGFIMNVVREENEEPVRVPPSISAHLKPHQIGGLRFMWENCIQSVKKIKSGDKGL
GCILAHTMGLGKTFQVIAFLYTTMRSIDLGLRTALIVTPVNVLHNWRQEFIKWRPTELKP
LSVFMLEDVSRDYSQRARLLAKWRRKGGVLLIGYAAFRNLSFGKNVRDRNVAFEISHALQ
DGPDILVCDEAHMIKNTKADITQALKQVKCQRRIALTGSPLQNNLMEYFCMVDFVREGFL
GSSHEFRNRFQNPIENGQHTNSTSHDVKIMNQRSHILYEQLKGFVQRKDMNVVKNELPPK
TVYVISVKLSPMQRKLYKRFLDVNGLTNDKVNSDKGIKTRCFFTAYQSLAKIWNHPGLLQ
MAKEHKDSHRREYAVENFLVDDSSSDENVDREMNGDKPRNKADCSNKKAENGLLNEDIDW
WVDLIQDKIYKEIEYSGKMVLLFDLLHMSSEVGDKALVFSQSLTTLDLIELFLAKVPRKG
QQDKYWKQGKDWYRLDGSTDGAERARLVEKFNNPHNSRVKCALISTRAGCLGINLHAANR
VIVVDGSWNPTHDLQAIYRVWRYGQQKPVYAYRLMAHGTMEEKIYKRQVTKEGLAARVVD
KQQVHRTMSKEEILHLFDFGDEENGDPVIERMQGTSSTSNEGTVACMSKLTSFPSSDGSS
SPDEFMDRLLSRHHPRWIANYHEHETLLQENEEDRLSKEEQDMALETFLRTFEWKEVQRV
SLDEGGAPHHSHNNSKAILVDRESGGPHQQHQKQQGRGRVRKCANLSHLLTLRSRDIRSG
STTVCDKCAQEISWESLHSKDGKGK
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaggagggagaatacaaggaattagaagattctgtaactcgcgaagaacaa
aaggaattagggaactctaaaattgatgaaggacagaaggaaatagaagagtatgaaaac
ggcaatgagcgaaaggaactagaagaccatgaagatggcaaagaagaaaatgaatttgat
gatggtgaaggagctaacgatttagaaggctatgatattggcagaaaacagcaagaacta
agggactataaaattatcgatggacacaagcaattggaaggcaatgaaaacggcaacgga
tggaagcagtcagatgactctacaattgacaaagaacaaaaggatgtagaagactctgaa
atcgtcaacgaagaagaggaattagaagacttagaaaatggcaaagaacatgaggaactg
gaggactctgaaattgggactgactcatttgttgaagattctgatgacgatgaaccattt
atctctgaaaatgaaagtgatttggatgttgaggcacctttgaccgatgcagaaattgag
gagctgattaatgaatttctggaagttgagagtaaggcagcagaggctcaggaatcactt
gaaaaggagtcactcgctcaagtagaaaatgaagtcaggtttgagttgtccgaaaagttt
cgtggagatgatttggaaaaggctgtctcagatgaaatggagacatacaagggagagtgg
gagagactgcttgatgacttggagacacagagtgcccttttattggaacaacttgatggc
gcgggtgttgagttacctagtctttataaatgggttgaaagtcaggcccctgaaggttgc
agcacagaagcttggagaaaaagaattcagtgggcaggttctcaactaactaatgagatt
gctgagtcaatttcaggtgctgaaaattatctgcaggcttgtcgacctgtaagaaggcat
catggcaaattattggaggaaggtgcaagtgggtttctctcaagaaaactggcaaccaat
gacaataaagattccctgaacgaaaatgccgagaaggattggaactcagttaacgagatt
ctccattctcataatcttccaggggaaagtaattcctttggtagcaagagttatgcttct
gtatatttggccagtactcctttgcaggcagcaaatatggggctcaattttcctggagtt
gatgaggtggaggaaatagatgacattgagaactgctccagagatcctttttatgcagat
gcagtggccaatgaagatgaaacaggtcttactgatgagcaaaagaagaagattaggaag
gttaaagaagaggaagatgcaatcttcaccttaaggctgcaaaatcgtctgaaacagaga
cggcatagaactcataaaacaaatcaggacactctgcttaaagagactgggtcaggtgtt
cacaatgatttcagggtgtgtgtcccctctggggaatgttccgcgaaggatactgattct
gctgagctccatggggaaaagatggcggttgaaggtgttccttcagtgtctgcaattcct
gcctctattttgtccaaacgttcccatgatagtggaaaccatgaaattgacactaaaaga
agtcgaactgtaataatagatagtgatgatgaaatggatgtcgtggagcaaacaacatcc
actaatgtgttgaatcctagcatcaatccatcaaaggtttctgaacattatcgctgcagt
gcctgttctgacatcctaaatgcttctaaagtatgcagacatcccctcttgggagtcatt
atttgtgaaaattgcaaacttgttataaataggagatcacctcgaaaggacccagattgc
tctgaatgttactgcggatggtgtggaaaggtagatgacttaattggctgtagattatgt
gcaatgctgttctgtgcaagatgtataggtcggaatttcagcaaagaaaaactggagaga
gtgcggtcttgtggttgggagtgttgttgctgtgcccccgaccagttagaacagctcgtc
ttggaatgtgacaatgcattgagggtaagcgacaatgtcgcttcctcctctggtagcgac
tcagacttacctcaaagtgttgtcgatattcaactcagctataagaaaaaactgaaaaaa
tggacaagaaggatacttgatgatactgaacttggagaagaaacaaaacaaaaaattgca
atcgaaaaggaacgccaagaacatcttaagtcattgcaagaacagtttgcttttaaaaca
ttgggtaagagtgctgcaacttgcaatggtaatgcggcagactttgctggtgaaaaagtc
ctgggtgatgcagtaaagggttttataatgaatgtggtcagagaggaaaatgaggaacct
gtgagggtacccccgagtatatctgcacacttgaagcctcatcagattggagggttacga
tttatgtgggaaaactgcatacaatctgtcaaaaagataaagtctggagataaaggcctt
ggttgcattctagctcacactatgggtctagggaagactttccaggtcattgcctttctt
tatacaacaatgaggagcattgatctgggattgagaacggcactgatagtcactccagta
aatgtgttacacaactggcgtcaagagttcattaagtggaggccaacagaactaaagcct
ttaagtgtatttatgctggaggatgtttctagggattactcccaaagagctaggctctta
gcgaaatggagaaggaaaggtggtgtattgttgattggttatgctgcttttcggaactta
tcttttggaaagaatgtcagggaccggaatgtcgcttttgagatatctcatgcattgcag
gatggacctgatatcttagtttgtgatgaggcgcacatgatcaagaacacaaaagctgat
atcacccaggccttgaagcaagtaaagtgccaaaggagaatagcattaactggctcacct
ttacaaaacaatctcatggagtacttttgtatggttgattttgtcagggagggtttcctt
ggcagcagccacgaatttagaaaccgattccaaaatcctatagagaatgggcaacatact
aattctacttctcacgatgtcaaaatcatgaaccaaaggtcacatattctttatgaacaa
ttaaaaggatttgttcagagaaaggatatgaacgttgtcaagaatgaattgcctccgaaa
acagtctatgtgatttctgtaaagctctcaccaatgcagaggaagttatataaacgtttt
ctagatgtgaatggactcacaaatgacaaggttaacagtgacaaaggcataaagacgcgt
tgcttctttactgcataccaatcattggctaagatatggaatcaccccggacttctgcaa
atggcgaaagagcataaagacagccacagacgtgaatatgcagttgagaatttccttgtt
gatgacagttctagcgatgaaaatgtggatcgcgaaatgaatggagataagccaagaaac
aaggccgactgctcaaacaagaaagctgagaatggtttgctcaatgaggatatcgattgg
tgggttgatcttattcaagataaaatctataaggagattgaatatagtggcaaaatggta
ttactgttcgatcttctgcatatgagttctgaagtgggggataaggcactcgttttcagc
caaagcttgactactctcgatctcattgagttgtttcttgcaaaggtaccaaggaaaggg
caacaagacaaatattggaaacaagggaaagactggtacaggctagacggaagtacagat
ggagctgagagggccaggcttgttgagaaatttaataatccccataatagtagagtgaag
tgtgcacttatatctacacgagcaggttgcttggggattaatcttcacgcagctaaccgc
gtaattgttgttgatggctcatggaatcctacccatgatcttcaagcaatttatcgtgtt
tggagatatggacaacagaaacctgtctatgcataccgcttgatggcacatggaaccatg
gaagagaagatttataagcgacaggtcaccaaggagggcctcgcagcacgggtggtggat
aagcagcaagtgcatagaacaatgtctaaagaagagatactgcatttgtttgattttggg
gatgaagagaatggtgatccagtgatagagagaatgcaaggaacatcaagtacatccaat
gaaggaactgttgcatgtatgtcaaagctgacttctttcccatcttctgatgggagtagc
tctcccgatgaattcatggataggctgctttctagacaccatccacggtggatagcaaac
taccatgagcacgagactctcctccaagagaatgaagaggataggctttcaaaagaagag
caagacatggcattggagacgttcttgcgcaccttcgagtggaaggaggtgcagagggtc
tccttagacgagggcggtgccccgcaccactcccacaacaacagtaaggcaatacttgta
gatagagaaagtggtgggcctcatcaacagcatcagaagcagcaggggaggggccgtgtt
cgcaaatgcgctaacctttctcacttgcttaccctcaggagtagggacattcggtcggga
tcgaccacggtgtgtgataaatgtgcacaagaaatcagttgggagtccctccacagcaag
gatggaaaaggaaaatga
DBGET
integrated database retrieval system
