Amborella trichopoda: 18444275
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Entry
18444275 CDS
T02990
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18444275
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18444275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_ACIN1
RRM_occluded
RRM_PARP14_3
RBD_AKAP-17A
TGF_beta
Motif
Other DBs
NCBI-GeneID:
18444275
NCBI-ProteinID:
XP_011627103
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MTEPSKVIHVRNVGHEISENDLLQLVQPFGVVDKRVMLRAKNQALLQMHDIPSAVNALQY
YTNVQPSVRGRNVYMQFSSHQELTTPDQNGQGSKDGDQDSQPNRILLVTIHHLLYPITVE
VLHQVFSPHGFVEKIVTFQKAAGFQALIQYQACQSAVQARNTLQGRNIYDGCCQLDIQFS
NLPELQVHFNNERSRDFTNPSLPNEQKGRPSQGALPGYGDSGGLYGMQPGGGRPVAFPQV
GAIGLGPIQIGTAAAIAAAFGGGLPPGITGTNDRCTLLVSNLNLEKIDEDKLFNLFSLYG
NILRIKMLKNKPDHALIQMGDGFQTELAVHFLKGAMLFGKRMDVNFSKHPHITPSTDTHD
YLGSNLNRFNRNAAKNYRYCCAPTKMIHISTLPPEVTEDEIVAHVEEHGNVVGSKLFEVN
EKKQALVLFDTEEQATEVLVCKHATTIGRAIIRISFSQLQSL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacggagccttccaaagttattcatgttcgtaacgtcgggcatgaaatatctgagaat
gatctacttcaattggtgcaaccttttggtgtggtcgataaacgtgtcatgctacgtgct
aagaatcaggctcttttgcaaatgcatgatataccttctgccgtcaatgcattgcaatac
tacacaaatgttcagccaagtgtcaggggcaggaatgtttacatgcagttctcttctcat
caagaactgacaacgcctgaccaaaatggtcaggggagcaaggatggagaccaggattca
caacccaaccgaattctcttagttacaattcatcacctgctctatcctataacagtggaa
gttcttcatcaagttttttctcctcatggatttgttgagaagatcgtgacctttcagaag
gcagccggatttcaggctcttatccagtaccaggcttgccaaagtgctgttcaagccaga
aatacgctgcaagggcgcaacatttacgatggttgctgtcagcttgatatccagttctcg
aatcttccagagttgcaagtgcacttcaataatgaaagatccagggattttaccaatcca
tctttgcccaatgaacagaaaggaagaccatcgcaaggagccttgcctggttatggggat
tcaggaggcctctatggcatgcaaccaggaggaggcaggccagtggcatttccacaggtg
ggtgcaatcggcctaggccctatccagattggcactgctgcagccattgcagctgcattt
ggtgggggtttgcccccaggcataactggtactaacgacagatgcactcttctggtgtcc
aatctaaatctcgaaaaaatcgatgaagataagcttttcaacttgttttccctctatgga
aatatattacgcatcaaaatgcttaaaaacaaacctgaccatgcactcattcaaatgggt
gatggtttccagactgaattggctgtacatttcttgaagggggccatgcttttcgggaag
cgaatggatgtgaacttctcaaagcatccgcacatcaccccttcaaccgacacccacgac
tacttaggctccaacctcaaccgattcaaccgcaatgctgccaagaactatcgctactgc
tgtgcccccaccaagatgatccacatctccaccctccctcccgaggtcactgaggacgag
attgtggcccatgttgaggagcacggcaatgtggttgggagcaagctctttgaggtaaac
gagaagaagcaggccctagtgctctttgacacggaggagcaggccaccgaggtccttgtt
tgcaagcatgccaccaccatagggcgtgccatcatccgcatctctttctcccagctccag
agcctgtag
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