Amborella trichopoda: 18444693
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Entry
18444693 CDS
T02990
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X2
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
atr
Amborella trichopoda
Pathway
atr00730
Thiamine metabolism
atr00900
Terpenoid backbone biosynthesis
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
Module
atr_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
18444693
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
18444693
Enzymes [BR:
atr01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
18444693
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Ortholog
Paralog
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Motif
Other DBs
NCBI-GeneID:
18444693
NCBI-ProteinID:
XP_011627248
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MGSVPMQNPTVTTTSNINQNWEDFDFRFSCFRVSKPRPQGFLIKSNICQFAPYPSSLKVS
RSRICAIPDIDDFYWEKAPTPLLDMVETPIHLKNLSLKDLKRLADEIRAEITFVLSKTCR
HFKPSLGVVELTIAIHYVFHAPMDKILWDVGEQTYAHKILTGRRPRLHTLRQKNGLSGFT
SRFESEYDPFGAAHGCNSVSAGLGMAAARDLKGKKDRIVTVISNWTTMAGQIYEAMSNAG
YLDPNMVVILNDSRHSLQMKPEEGSKMAINALSSTLSKIQSSRSFRKFREAAKGVTKRIG
RGMHEIAAKVDEYARGMMGPLGSTLFEELGLYYIGPVAGHNIDDLICVLQEVASLESTGP
VLVHVITEEECESKDSKKNEIVSKQPEPRNLSTLINHPVVLGNGFSRTYMDFFVDALLVE
AERDKNIVVVHAGMGMDPAFSHFQARFQDRFFDVGLAEQHAVTFSAGLSCAGMKPFCVIP
SSLLQRAYDQVVQDVDMQRMPVRFVITSAGLVGSDGPTYCGAFDITMMSCLPNMIVMAPS
NEADLIHMIATAAAVNDCPICFRYPRRHVFGADLPAGSHGVPIEIGRGSVIAEGKDLALL
GYGVMVQNCLKARTLLLDLGIVATVADARFCKPLDMDLVRHLCQAHPLLITVEEGSIGGF
ASHVAQFIALDGLLDNGNFKWRPIVLPDNYIEHASPKEQLSMAGLTAHHIAATALSLLGR
TRDALQLMH
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgtccctatgcagaacccaactgtgacaactacgtctaatatcaatcagaat
tgggaggattttgatttccgtttcagttgcttccgggtttctaaaccccgaccacaaggg
ttcctcatcaaatcgaacatttgccagttcgctccttaccccagttctttgaaggtatca
agaagccgaatatgcgctattcctgatatcgatgatttttactgggagaaagctccaacc
ccattactggacatggttgaaacaccaatacatctaaaaaacttatcactgaaggatttg
aaacggttagccgatgaaattcgtgcggagatcacctttgttctttccaaaacatgtaga
cattttaagcccagccttggtgttgtagagttgaccattgcgatacattacgtgttccat
gcaccaatggacaagatactttgggatgttggagaacagacttatgcacataagatcctt
acaggacgacgcccacgtttgcataccctgagacagaagaatgggctttcaggtttcacc
tcccgttttgaaagtgaatatgacccttttggtgcagcacatgggtgtaatagtgtgtct
gctggacttggcatggctgctgcacgggatctcaaaggaaagaaagatcgtatcgtaaca
gttataagcaattggacaaccatggctggtcagatttacgaggctatgagtaatgctgga
tatctggatccaaacatggtagttattttgaatgatagcaggcattcactacaaatgaag
ccagaggaaggatctaaaatggccatcaatgctctgtctagcacattaagcaagatccag
tccagcagatccttccggaaatttagagaagctgcaaagggtgttacaaagaggataggt
agaggaatgcatgaaatagcagctaaagttgacgaatatgcacgtggtatgatgggtccc
ctgggttcaactctcttcgaagagcttgggttgtactatattgggccagtggctgggcac
aacattgatgatctgatctgtgtgctccaagaagtagcatccctggagtcaactggccct
gtactggttcatgtcatcacagaggaagaatgtgaatcgaaggacagcaagaaaaacgag
atagtgtccaagcaaccagaacctaggaatttgagcacgttgattaatcaccctgtggtt
ctgggcaatgggttctctaggacatacatggatttctttgtggacgctttgcttgtggaa
gctgagagggacaagaatatagttgtggtacatgctggaatggggatggaccctgctttc
tctcatttccaagcaagatttcaagacaggttctttgatgtggggttggctgaacaacat
gctgtcacattttctgctggtttgtcatgtgcgggcatgaaaccattttgtgtaattcct
tcttctctcttgcaaagagcgtatgatcaggtggtccaagacgtggatatgcagaggatg
ccagtccggtttgtaatcactagtgcggggttagtgggatcagatgggccaacatattgt
ggggcatttgacataacaatgatgtcatgcttgcccaacatgattgtcatggcaccatcc
aatgaggctgacctcatccacatgattgccactgcagctgcggtcaatgactgcccaatt
tgtttccgataccctagacgacatgtctttggggccgacctaccagctggaagccatgga
gtgcccattgagattgggagaggaagtgtgattgcagagggaaaggatttagctctattg
ggatatggggttatggtccagaattgcctaaaggcacgcactttgctcttggacctaggc
attgtggccactgtagcagatgcacgcttttgcaagccacttgacatggacctcgttcgc
catctctgccaagcgcaccctctccttattactgtggaggagggttccattgggggcttc
gcctcccatgtggcacaattcattgctcttgatggtcttctagacaatggaaatttcaag
tggaggccaattgttttgcctgataactacattgagcatgcatccccaaaagaacagctc
tctatggctggcctcactgcccatcacattgctgcaactgctcttagcctccttggtcgc
acccgtgatgcccttcagcttatgcattga
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