KEGG   Amborella trichopoda: 18444939
Entry
18444939          CDS       T02990                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
atr  Amborella trichopoda
Pathway
atr00040  Pentose and glucuronate interconversions
atr01100  Metabolic pathways
Module
atr_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:atr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    18444939
Enzymes [BR:atr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     18444939
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim NosD
Other DBs
NCBI-GeneID: 18444939
NCBI-ProteinID: XP_020529669
LinkDB
Position
Unknown
AA seq 250 aa
MRIWCWIFAFACGAAASAAVAKSPPHGVFNVKEYGAVADGKSDTAQAFLGAWKDACAWKG
RSRMVIPEGSFLVGPDEFEGQCPNASPIVVQSIKFYSMTNMTLRRISSIDSKFFHIAMHG
CKNVKAHHLRISARANSPNTDGIHISSSTGIKIARSQIGTGDDCISIGPGSHDIFIKNIF
CGPGHGISLGKYQNEEDVSGLKVRNCTISNTTNGMRIKTWPGSTSSSATNFTFNDVIMNN
GLNPIIIDQD
NT seq 753 nt   +upstreamnt  +downstreamnt
atgagaatatggtgctggatctttgcatttgcatgtggggcggccgcctcagctgccgta
gcaaaatccccgccccatggagttttcaatgtcaaggagtatggtgcagttgccgatggc
aaatccgataccgcgcaggctttcttgggagcatggaaggatgcatgtgcatggaagggg
agatcgaggatggtgatacccgaagggagcttcttggttgggcctgacgagtttgagggc
caatgtccaaatgcatcacccatagtggtgcagtcaatcaagttttactctatgacaaac
atgacattgaggaggatttcttcgattgatagcaagttctttcacatagcgatgcatggt
tgcaagaatgtgaaggcccatcacctccgcatatctgcccgagccaatagcccaaatacc
gatggcatccacattagttcttccactggaatcaaaattgctcgctcccaaattggaacc
ggtgatgattgcatctcaattggccccggtagccatgacatattcattaagaacattttt
tgtggaccaggacatggcataagtttaggcaaataccagaacgaggaggatgtgagcggg
ctaaaggtgagaaattgtaccatctctaacaccaccaatggcatgaggatcaagacctgg
ccgggctccactagcagctcagctacaaatttcacattcaatgacgtcattatgaataac
gggctcaacccgatcatcatagaccaagattag

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