Amborella trichopoda: 18445093
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Entry
18445093 CDS
T02990
Name
(RefSeq) BRCT domain-containing protein At4g02110 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
atr
Amborella trichopoda
Pathway
atr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18445093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atr03032
]
18445093
03400 DNA repair and recombination proteins [BR:
atr03400
]
18445093
DNA replication proteins [BR:
atr03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
18445093
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
18445093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
18445093
NCBI-ProteinID:
XP_006855301
UniProt:
U5D8Q2
LinkDB
All DBs
Position
Unknown
AA seq
1226 aa
AA seq
DB search
MRDPQAINDGNSQLFSGVRFVLFGFDEAAQIQYQSELENGGAIDVSPYNSSCTHVIVHRL
TYNDPVCVEARHDGKTLVSALWVEDSLEFGKLADANQILYKPVRDLNGIRGCQSMHICLT
GYQKQERSDIMKMVDLMGAQFTKPLIASKVTHLVCYKFEGEKYNLAKKLGIKLINHRWLE
DCLKAWDILPEDRYRISGWELEMLEAEARDSEEETTKAVIPTTPFRARGNSGVLPLQSEV
LRSTNSDISMPQGARSIQKKTDAAEASSAVQIDIARNDMLFSTPCKEAPNRKDHVPCDGT
NKECNEMLSYQDMGAKLMADNDHVMEDIVVGGDTTTSIDEVQNHMVGANLVSSEKKTPKR
SHSSAINVTPNSMSYSRKISKKSTMAELLDELSSGLNSSSLKTFGENDSIKNDDNVVSTA
QPFKTSVHRVGEEVINVEKLPQWSTGKGEEAVLETGAVPFREGKALESQKHIFETSLGNG
HSAETVLDGLPLHQTRINVNPSVKEENKRLECNALVNCTENGQTGSTENQCATLRKKTLK
RRPLISKKGEHKLDLSLSKMAGIPTNGELKAVLDMQMDMSNGSGESIMKNLKPTEAVTAD
VKPKTSLNGFQTLEMPTKSENDNGLLNELASLSNHGISEESKSHQSGKSPESIKSAAIKL
QSSTIVEECDNGSFDKKKDGEHNNVEDKKLVPKKSMRCRAKLSTSDLSKGKSECPSGQSG
SQGEVTICAEKADETGLYTGKSLKDLNTEMEDLTVKPDDCMAVAQENEVMSPKSISRKNV
KKNAIVSETSMDAEKENKLIPTGEETSESAKPQYRNGRVFKKILKGKKTKVENSTMNLGT
QDKVAKLKTSLKKSVPENVILNDTYMARENENKRIPRGKQTAEMAKPQSEKAAVKSETKT
FQNIDMDNGFEAKGLGRVRQSAIMIQPAQRWFILSGHPLQKKEFQQVIKKVRGKLCKDSH
NWSYQATHFIVPDPVRRTEKFFAAAAAGRWILKTDYLTSSYQAGWFLEEEPFEWHKSGLS
EDGAINLEAPRKWRLLREKTGHGAFYGMRIVVYGECIAPTLDSLKRVVKAGDGVILATSP
PYTRLLKSGVDYAVVSPGMPHADAWVQEFMHHGIPCILADYLVEYVCKPGYPLDRHVLFK
MHDAAKKSYDNLMARGQEVVKGEEANGDDTICDVCHSGERANVMLLCGDENGAGCGVGRH
IDCCDPPFEAVPEEDWFCSERCKPLG
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatcctcaagccatcaatgacggtaactctcaattgttttctggggttcgtttc
gttctctttgggtttgatgaggccgcacaaattcagtaccaatccgagcttgaaaatggt
ggagctattgatgtcagcccttacaattcgagctgcacccatgtgattgtgcatcgcctt
acttataatgatccagtttgtgttgaagctagacatgatggaaagactctggtttcagcg
ctttgggttgaggacagcctagaatttggaaagcttgcagatgctaaccagatcttatac
aagcctgtaagggatctgaatggcattcgtggttgtcagtccatgcacatttgcttgact
ggatatcagaagcaggaacgttctgatattatgaaaatggtggatctgatgggagcacaa
tttacaaagcctctcatagcaagcaaggttactcatcttgtatgctacaaatttgagggt
gaaaaatacaaccttgctaagaaattgggaataaagcttatcaaccatcgttggttggag
gactgtttaaaagcatgggatattctccccgaagatagataccgcatcagtggttgggaa
ttagaaatgctggaggcagaggccagggactctgaggaggaaacaacaaaggcagtgatc
cctacaacaccatttcgagcaagaggcaactcaggtgttcttcctttgcaaagtgaagtt
ttgaggtccacaaattctgatatttccatgccacaaggagctcgttcgattcagaaaaaa
acagatgctgctgaagcctcctcagccgtccaaatagatatagctagaaatgatatgcta
ttttcaactccatgcaaagaggcacctaatagaaaagatcatgtgccatgtgatggtaca
aataaagagtgtaatgaaatgttaagctatcaagatatgggagccaagttaatggcagat
aatgaccatgtgatggaggacattgttgtaggaggggatacaaccacctcgattgatgaa
gtccaaaatcatatggttggagcaaatttggtttcatctgaaaagaaaacccccaaaaga
tctcattctagtgccataaatgttacaccaaattctatgagttattctcggaaaatatca
aagaaatccacaatggcagaattattggatgagctttcaagtgggttgaacagctcttcg
ctaaaaaccttcggggaaaatgattccatcaagaatgatgataatgttgtgtcaacagcc
cagcccttcaaaacttcggtgcacagggtaggtgaggaggtgatcaatgtggagaagcta
cctcagtggtcaactgggaagggggaggaggcagttttagaaactggtgctgtacctttt
agggaaggaaaggctctagagagccaaaagcacatttttgaaacttcattgggaaatggt
cactcagcagagacagtgttggatggtttgccccttcaccaaactcgaatcaatgttaat
ccttctgttaaagaagaaaacaaacggttggagtgcaatgcccttgtcaattgtacagaa
aatggacaaactggatccactgagaatcaatgtgcaactctgaggaagaaaactctcaaa
cgcaggccactaatttcaaaaaagggtgaacataagttagacttatctttgtcaaaaatg
gcaggcattccaacaaatggtgaattgaaagctgtgctagatatgcaaatggacatgagc
aatggctctggagaatcgatcatgaaaaacttgaagccaactgaagcagtgactgcagat
gtgaagcctaaaacttcattaaatgggttccaaactttggaaatgcccactaaatctgag
aatgataatggattgttgaatgaactggcaagcttatccaatcatggtataagtgaagag
agtaaatctcaccaaagtggaaagtctcctgaaagcattaaatctgcggcaataaagctt
caaagcagcaccatcgtagaagaatgtgacaatggtagttttgataagaagaaagatggg
gagcataacaatgtggaggataagaagttggtaccaaagaaaagtatgagatgtagggct
aaacttagtacaagtgatcttagcaaaggtaaatctgaatgcccttcaggtcaaagtggc
tctcaaggtgaagttacgatttgtgcagagaaagctgatgaaactggactgtacactggg
aaaagtttgaaggacttgaacactgagatggaggacctaactgttaaaccagatgactgc
atggcagttgctcaagagaacgaagtgatgagcccaaaaagtatttccaggaaaaatgtg
aagaagaatgcgattgtcagcgagacatccatggatgctgaaaaggaaaataagctaatc
ccaactggtgaggagacttcagaatcagcaaagcctcagtataggaatggacgagttttt
aagaaaattttaaaggggaagaaaactaaggtggaaaattcaactatgaatctgggcact
caggataaggtggccaagcttaaaacttctttaaaaaagagtgtgccagagaatgtgatt
ctcaatgatacatatatggctagagagaatgaaaataaacgaattccaagaggtaaacag
actgctgaaatggcaaaacctcagagtgaaaaggctgcagttaaatctgagacaaagacc
tttcagaatatagacatggataatggttttgaagcgaagggcttggggagagtgagacag
tcagcaataatgatacaacctgcgcaaagatggtttatattgagtggtcatcctcttcag
aagaaggagtttcagcaggttatcaaaaaagtgagagggaaactttgcaaagattctcac
aactggtcttatcaggccacccacttcattgttcctgatccagttaggaggacagaaaag
ttttttgcggcagcagcagctgggagatggatattaaaaactgattacttaacatcaagc
tatcaagctgggtggtttcttgaagaggagccttttgagtggcataagagtgggttgagc
gaagatggagccatcaacttagaagctccgaggaaatggcggttgttaagggagaagaca
ggacatggtgccttctatggcatgcgcatcgttgtctatggagaatgcattgcacccact
ctggattccctaaaacgtgtggtgaaggctggcgatggggtaattctagccacatcccct
ccatacacacgcctcctcaagtcaggtgtggactatgcggtggtgagccctggcatgcca
catgctgatgcatgggttcaagaattcatgcatcatggcatcccatgcatcttggctgac
tatttggtggaatatgtgtgcaaacctggttatcctcttgataggcacgtgctattcaaa
atgcatgatgctgctaaaaaatcctacgacaatcttatggcaaggggtcaagaagtggtg
aagggtgaagaggccaatggtgatgataccatttgtgatgtgtgccattcaggcgagcga
gcaaatgtgatgctcttatgtggtgatgaaaatggggcaggttgtggggttggaaggcac
attgattgttgtgatcccccatttgaggctgttcctgaagaggattggttttgctcagag
agatgtaagcctcttggttga
DBGET
integrated database retrieval system
