Amborella trichopoda: 18445106
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Entry
18445106 CDS
T02990
Name
(RefSeq) replication protein A 14 kDa subunit
KO
K10740
replication factor A3
Organism
atr
Amborella trichopoda
Pathway
atr03030
DNA replication
atr03420
Nucleotide excision repair
atr03430
Mismatch repair
atr03440
Homologous recombination
atr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18445106
03420 Nucleotide excision repair
18445106
03430 Mismatch repair
18445106
03440 Homologous recombination
18445106
03460 Fanconi anemia pathway
18445106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atr03032
]
18445106
03400 DNA repair and recombination proteins [BR:
atr03400
]
18445106
DNA replication proteins [BR:
atr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
18445106
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
18445106
MMR (mismatch excision repair)
18445106
DSBR (double strand breaks repair)
HR (homologous recombination)
18445106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_3
DUF5818
Motif
Other DBs
NCBI-GeneID:
18445106
NCBI-ProteinID:
XP_006855313
UniProt:
U5D3G2
LinkDB
All DBs
Position
Unknown
AA seq
106 aa
AA seq
DB search
MDISSPAVFVNGELLKMHTGRRVRSVVQVVRVDTGGFVAQTSDGLQLSVKATTVDPLSKF
VEVIGVAEGNQTIRAEMCTNFGDAFDMASYNQLCQLANSEHNSLFI
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atggacatttcaagccctgcagtttttgtcaatggagaacttttaaaaatgcacaccggg
cgaagggttcggtcagttgttcaggttgtgcgagtcgatactggaggcttcgtagctcaa
acttcagatggcctgcaactatctgttaaagctactactgttgatcctctgtcaaaattt
gttgaggtgattggtgttgctgagggcaatcagaccattcgagctgaaatgtgcaccaac
tttggagatgcatttgatatggcttcatacaatcagttgtgccaactagccaactcagaa
cacaacagtttgtttatttag
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