Amborella trichopoda: 18445356
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Entry
18445356 CDS
T02990
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18445356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18445356
03032 DNA replication proteins [BR:
atr03032
]
18445356
Spliceosome [BR:
atr03041
]
Complex A
U1 snRNP components
Sm proteins
18445356
U2 snRNP components
18445356
Complex B
U1 snRNP components
18445356
U4/U6.U5 tri-snRNP components
18445356
Complex C
U2 snRNP components
18445356
DNA replication proteins [BR:
atr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
18445356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
DUF2986
Motif
Other DBs
NCBI-GeneID:
18445356
NCBI-ProteinID:
XP_006855556
UniProt:
U5D9H7
LinkDB
All DBs
Position
Unknown
AA seq
105 aa
AA seq
DB search
MEEDANVSKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
VREMWTEVPKTGKGKKKAHPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatgctaatgtgagcaagactgaggaagaggaattcaacactggtccgctt
tccgtgttgatgatgagtgttaagaacaatacccaggttcttatcaactgtcgaaacaac
aagaagctccttggacgagttcgggcctttgatcgtcactgcaacatggttcttgaaaat
gtccgggagatgtggactgaggtgccaaagaccggaaaaggtaagaagaaagcacatcca
gtgaacaaggacaggtttattagtaagatgtttcttcgtggagactcagttatcatcgtc
ctgagaaaccccaagtga
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integrated database retrieval system
