Amborella trichopoda: 18445387
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Entry
18445387 CDS
T02990
Name
(RefSeq) protein argonaute 1 isoform X2
KO
K11593
eukaryotic translation initiation factor 2C
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18445387
03036 Chromosome and associated proteins [BR:
atr03036
]
18445387
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
18445387
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18445387
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
18445387
microRNA pathway
RISC loading complex
18445387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18445387
NCBI-ProteinID:
XP_006855588
UniProt:
U5D4D1
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
MPRKKKTMDPTSGLGESSDAPSQAPPEARQPPPQQRPSPPSQPTQQPQSAPYQQQGRGWG
LQPGRGGYTQQPQYQGRGGPQGRGQQPPYPQQPPYQQQPPYQQQPSYQQQPRAPYQQPSG
PYQGGQMGGPQGGGGARRRGGGRGGGPTSGPSGSYARPPVPDLPQAVAQRPPSQYPPQMY
AQQFGSFQQTPSQAGEPQESGASSSSAHQLAEQVQQLTLVKQEEAVQQPPQSSKSMRFPS
RPGKGSMGTRCMVKANHFIVELPDKDYHQYDVSITPEVTSRAVNRAVMKQLVKLYQESHL
GRRFPVYDGRKSLYTAGPLPFTSREFAINLMDEDDGMGTLRRERQFKLVIKFAARADLHH
LGLFLAGKQSDAPQEALQVLDIVLRELPTNRYSPVGRSFYSPDLGRRQSLGEGLESWCGF
YQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVTQLLGRDVTSRPLSDADRVKIKKALRGV
KVEVTHRGTMRRKYRISGLTSQPTRELTFPVDDNGTMKYVVQYFQETYDFNIRHTTWPCL
QVGNHQRPNYLPMEVCQIVEGQRYSKRLNERQITALLKVTCQRPHDRELAIIRTVHHNSY
HQDPYAKEFGIKISDKMASIEARILPPPWLKYHDTGREKDCLPQVGQWNMMNRKMVNGGT
VNNWTCINFSRTVQDSAAQRFCQELSQMCHISGMTFNPEPVIAVSSARPDQVERTLKSRF
QEAANVLRGKELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLAN
VALKINVKVGGRNTVLVDAIARRIPLVSDVPTIIFGADVTHPHPGEDSSASIAAVVGSQD
WPEVTKYAGLVCAQAHRQELIQDLYKVTQDPQRGTVTGGMIKELLISFRRATGQKPQRII
FYRDGVSEGQFYQVLFHELDAIRKACSSLEPNYQPPVTFVVVQKRHHTRLFANNHKDHHL
TDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLFDENHFTADGLQSLT
NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMSSGLPGRGAPSGAGSR
ASSTRAAGSSVRPLPALKENVKRVMFYC
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaaaaagaagacgatggatccaaccagcggacttggggagagttcagatgct
ccttcccaagcccctcctgaagctcgccagccccctcctcaacagcgtccctcaccccct
tcacaaccaacccaacagccccagtctgctccttatcaacaacaaggaaggggatggggc
ctacaaccaggccggggtggctatactcaacaaccgcaataccaaggacgaggaggccct
cagggccgaggtcagcaacctccttatccacagcagcccccttatcaacagcagccccct
tatcaacagcagccatcttatcagcagcaacctcgagccccttaccagcaaccttctggt
ccttatcaagggggccagatgggtgggccccaaggtggtggtggggccaggaggagggga
gggggccgtggtggtgggcccacctcgggcccttctggttcatatgctagacccccagtt
cccgatctgccccaagctgttgcccaaagaccaccatctcaataccctccgcaaatgtac
gcgcaacagtttggttcgtttcaacaaacaccatctcaggccggtgagccccaggaaagt
ggcgcttcgtcttcttctgcccatcagttagcagagcaggttcagcagcttacattggtg
aaacaggaggaggctgtgcagcagccaccccagtcgagcaagagcatgagatttccttcg
aggcctgggaaggggtcgatggggaccaggtgtatggtgaaggcaaaccatttcattgtg
gaactgccagataaggactatcaccaatatgatgtgtccatcacacccgaggttacttcg
agagctgtgaatcgagcagttatgaagcagctagtgaaactttaccaagagtctcacttg
ggaaggaggtttccagtttatgatggtcggaagagtctttatactgctggacctctcccc
tttacctcaagagaatttgccataaatctgatggatgaagatgatggaatgggcactctt
agacgtgagaggcaattcaagcttgtaattaagtttgctgctcgtgctgacctgcatcac
ttggggttatttttagccggaaaacaatctgatgctccccaagaagccctccaggttctg
gatattgttttgcgagaattgccaaccaacagatattcccctgttgggcgttcattctat
tctcctgatcttggtagaaggcagtcgctgggtgagggtttggagagctggtgtgggttt
taccagagtattcgacccacacaaatgggtctttcgcttaatattgatatgtcctctact
gctttcattgagccacttcctgttatcgaatttgttactcagcttttgggcagagatgtt
acctcgaggccattgtctgatgctgaccgtgttaagatcaagaaagctcttagaggtgtg
aaggttgaggttacccacagaggcactatgcgtcgcaaataccgcatatcgggtttaact
tcacagccaacaagagagttaacgttccctgtggatgataatggaacgatgaaatatgtt
gtccagtacttccaggagacgtatgacttcaacattaggcatactacgtggccttgtctg
caagtcgggaatcatcagcgcccaaattacctcccaatggaggtatgccaaatcgttgag
ggccaacgatactcaaagcgattgaacgaaagacaaatcactgcccttctgaaagtgacc
tgccagcgaccacatgaccgggagcttgctattattcggactgtgcaccataattcttat
catcaggacccttatgcaaaggagttcggtattaaaattagtgataaaatggcatcaatt
gaagcacgcattctgcctccgccctggcttaaataccatgataccggcagggagaaagat
tgcctacctcaagttgggcaatggaacatgatgaacaggaaaatggttaatggaggcact
gtaaacaattggacgtgtataaacttctcccgtactgttcaagacagtgctgctcaacgc
ttttgccaggagctttctcaaatgtgtcacatttcgggaatgacattcaacccagaacct
gttattgctgtatcttctgctcgtcctgatcaggtggagcgaactctgaaatcccgattt
caggaggcagcaaatgttcttcgtggcaaagaactagatctgctgattgtaatcttgcct
gataataatggttccctttatggggatctaaagagaatttgcgagacggatttgggcttg
gtctcccaatgctgcttaactaagcatgtatttaaaatgagcaagcagtatcttgctaat
gttgctttgaaaatcaatgttaaggtcggtgggaggaatactgtacttgtggatgcgatt
gcaaggagaattccacttgtaagtgacgttccaactataatatttggggctgatgtcact
catcctcacccaggagaggattccagcgcatccattgctgctgtcgttggttctcaggac
tggccagaggtgactaaatatgctggattggtctgtgctcaagctcacagacaagaattg
atccaagatctttataaggtcacccaggatcctcaacgtggaactgtgacgggtggcatg
atcaaggagttgctcatttcattcaggagagcaactgggcaaaagcctcagaggattatt
ttctacagggatggagttagcgagggccagttttaccaggttttgtttcatgaattggat
gctattcgcaaggcatgttcctcccttgagccaaactatcagccccctgtgacatttgtt
gtggttcaaaagcggcatcacactcggctatttgcaaacaatcataaggatcatcatctg
actgacaagagtggaaatatattacccggaactgtggtggattcaaagatctgccatccc
actgaatttgatttttacttatgcagtcatgctggcatccagggtactagccgccctgcc
cattaccatgttttgtttgatgagaatcacttcacagccgatggcctccagtcgctcact
aataatctgtgctatacgtatgcacgttgcacccgctctgtctctattgtgccgcctgct
tactatgctcatctagcagccttcagggctcgcttctacatggagccggagacttcagac
agtggatccatgtctagcgggctgcctggtaggggagcacccagcggtgctggcagtcgt
gccagcagcactcgtgcagcaggctccagcgtgcggccacttccagccctcaaagaaaac
gtgaagcgcgttatgttctattgctga
DBGET
integrated database retrieval system
