Amborella trichopoda: 18445524
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Entry
18445524 CDS
T02990
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein MLH3
KO
K08739
DNA mismatch repair protein MLH3
Organism
atr
Amborella trichopoda
Pathway
atr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
18445524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18445524
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
18445524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18445524
NCBI-ProteinID:
XP_020529956
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MKCIERLPRSVCSSLRSSAILFDLPKVVEELIYNSVDARATKVHVSVSIGTGYIKVDDDG
CGITREDLVLLGERYATSKLHSLAELDASIESLGFRGEALSSLSDVSLLEVITKARGRAN
AYHKVIKGCKCLSLGIDGHRQDVGTTVIVRDLFYKQPVRRKYLQSSPRKVLHSVKKCVLR
FALLHPEVSFKVTDLESEDELLCTFPSSSPLPLVTKSFGEEVSSHLQKVDYSRGALRISG
YLSNPADAFSTKVLQYIYINSRFVSKSPIHKLLNRMAVSFQYSLVSGIGESLCQGKQSAI
KEARHLPSYPAYILNLRCPLATYDLTSEPSKTIVEFKDWVLVLSFIEKAISHYWRQDPVH
VLPGSSLGTEDDSWKEEKSERRSNKNPLEEAWLKHDSSTADSYEDIGKKKCKIQHFQDPE
TMMEENGISTHKRSFRTPLRKSHKVSPCKGDSFERNSHVWESGLQIIWGGHGCKVLRRIR
GDKGRECIEKDSTLELRLENSHDNTRLNKRSRTSTERCYYFEDSDEKKPFLSRCPRKLET
LASKPLHFPGNMLDSSGLLYNEGRFEGQFDHYAYESKVPTFYDSLDVADVELGKESSDFY
SVIPLLPKIASSQQSPLALYKYQDTGKVDLPSRGFINPHYWKDMRSIEEQIACGGLFSQD
LEKGPDSESVNSRWCIRSPDSDTEGIKVGGDFENCVSSSGLSAQKVKDNFVSYSPRENSY
MGGALYVSSCSLGDSYFSSCNSPERKLHRPLRNRSHLDGIFDEGSGRLRLLSSPMDSLDL
GAGVANDTENFPTAFESSHFYNGLGRKKKGSSKKYKDDQCEEVSKSRTRRSSSAPPIYRG
KRKFSFSSNVMAVTHGQEFPVCRSTEQIPSLPDGASEQYPELMDCSLTCFRQSPERKPSQ
MEISNETERSGVLERSQSIPMCRDTDVVDDSINALTKWRSADSQATVEHLNKMQMDTDKP
RFKPGYDDSILDISSGLLHLASSSLIPESISKDCLDNAKVLLQLDKKFIPVTAGRYLAII
DQHAADERIRLEDLREKVLLGEGKTITYLDCEQELVLPEVGHQLLQNYAEQIQSWGWVCN
FNTGGNGSFTKNLNLLQRQGQRQGQSFKATLLAVPCILGIKLSDKDLIEFIDQLVETDGS
STVPPSVLRILNFKACRGAIMFGDSLLPSECSLIVEELRATSLCFQCAHGRPTTVPLVNL
EALHKQLSDLGTLNNQFEEEWHGLKRSKPSLERAKLQLSTAKIQRGTD
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcattgagcgccttccaagatctgtttgcagttccttgcgctctagtgcaatt
ctgtttgacttgccaaaagttgtggaggagctgatctataatagtgtggatgcgagagct
acaaaggtacatgtctctgtaagcattgggacaggctacataaaagtagacgatgacgga
tgtggtatcacacgggaagatttggtgcttctcggggaaagatacgcaacatcaaagctt
cactctttggctgaacttgatgccagtattgaaagcttggggttcagaggagaggcattg
agttctctctctgatgtctcgcttttagaagtcatcacaaaggctcgtggaagggcaaat
gcttaccataaagtcattaagggttgcaagtgcctatctttaggaattgatggtcatagg
caagatgttggtacaacagttatagttcgtgatttattttacaagcagcctgttcgaaga
aagtatctgcaatccagccctagaaaggtgttgcactcggtcaagaaatgtgtacttcga
tttgcccttcttcaccctgaagtttcatttaaagtcacagatcttgaaagtgaagatgaa
ttgctctgcacgtttccatcctcgtctcccctacctttagtaactaagagttttggtgaa
gaggtttcgagtcatttacagaaagtagactattctagaggtgcactgaggatatctggt
tacttatcgaatccagctgatgctttttccacaaaggttttacaatatatatacatcaat
tcgcggtttgtaagcaaaagcccgatacacaagttgctgaatagaatggcagttagtttt
caatattctttggtttctgggatcggggaatctctatgtcaagggaagcagtctgcaatc
aaggaggcacgtcatttgccatcatatcctgcatatatactgaatttacgttgtccgctt
gctacttatgacctaacttctgaaccatcgaagacgattgtagaattcaaggattgggta
cttgtactctcctttattgagaaagctataagccactattggagacaagatccagttcat
gtcttgccaggaagttctctgggcactgaagatgactcctggaaagaagaaaagtcagaa
agacgcagcaataaaaatcctttggaagaagcctggctgaagcatgactcctctactgca
gattcatatgaagacattggcaaaaagaaatgtaaaattcagcattttcaggatcctgaa
acaatgatggaagaaaatggcatttcaacccacaagagaagtttcaggacaccattgaga
aaatcacacaaagtgagcccttgtaaaggtgactcctttgaaaggaacagtcatgtatgg
gaaagtggacttcaaattatttgggggggccatggatgcaaagttctcagaagaatccgt
ggtgacaaaggccgggaatgcattgaaaaagatagcactctagaattgagattggaaaat
agtcatgataacactagattgaataaaagatcaagaacaagcacagaaagatgttattac
tttgaagattcagatgagaaaaagccatttctgtcaagatgccccaggaaacttgaaaca
ctggcttccaaacctctccattttccaggaaatatgttagacagttctggcttattatat
aatgaagggagatttgaaggtcagtttgatcattacgcatatgaatcgaaagtgcccacc
ttttatgatagtcttgacgtagctgatgttgaacttgggaaagaaagttctgatttttat
tctgtgattcctttactacctaaaattgcatcatctcagcaatcgcctttagctctatat
aagtaccaggacactggaaaggtagacctgccatcgaggggcttcataaatcctcactat
tggaaagacatgcgatcaatagaggaacaaattgcttgtggtgggttattttcacaagat
ttggagaaaggcccagatagtgaatctgttaattctcggtggtgtattagatctccagat
tctgataccgaagggatcaaagttggaggggattttgagaactgtgtaagctctagtggc
ttgagtgctcaaaaggtgaaggacaactttgttagttatagtcccagggaaaatagttat
atgggaggagcactttacgtttcaagttgttcacttggtgattcctatttcagcagctgc
aatagtccagaaagaaagttacacagacctctaagaaatagaagtcacttggatgggatc
ttcgatgaaggaagtggaaggcttcgcttgcttagttctccgatggactcgttagattta
ggtgctggtgtagcaaatgatactgaaaattttccaaccgcttttgagagttcacatttt
tacaatggcctaggaaggaagaagaaaggaagttcaaaaaaatacaaagatgatcagtgt
gaagaagtttcgaagtccagaacaagaagaagcagttctgctccaccaatttaccgtggc
aagagaaagttttcattctcaagtaatgtaatggctgtcactcatggacaggaatttcca
gtttgtaggagcacagaacaaattccatcgctgcctgatggtgcatcagagcagtatcct
gagctgatggattgttcactaacttgtttcaggcaatccccagagaggaagcccagtcag
atggaaatatcaaatgagacagaaaggagtggagttttagaaagatctcaatccattcca
atgtgtcgtgatactgatgttgttgatgattccataaatgctttgacaaagtggcggagt
gctgattcacaggctacagtggagcatctcaacaaaatgcaaatggacacggataaacca
cgatttaaacctggatatgatgatagcatcctggatatatcttcaggactgctgcatctt
gccagttcttccttgattcctgaatcaatcagtaaggattgccttgacaatgcaaaggtc
ctccttcagctggataaaaaattcatcccagtcactgctggtagatatcttgctattatt
gatcagcatgctgcagatgaacgcattcgtttagaagacctgcgtgaaaaggtgctcctt
ggtgaagggaaaacaattacctatttggattgtgaacaagaattagtgcttccggaggtc
gggcaccagttacttcagaactatgcagagcagattcagagttggggttgggtgtgcaat
ttcaacactggtggaaacggatctttcaccaagaacctgaaccttctccagaggcagggg
cagaggcagggacagtcctttaaagctactcttcttgctgttccctgtatcctggggatc
aagctctctgacaaggatcttatagaatttattgatcagcttgtggagacagatgggtca
tcaacagtacctccgtcagtgctgcgaatactcaactttaaagcatgcagaggtgccatc
atgttcggggattccttgttaccttctgaatgctcgctcatagtggaggaactcagggca
acatccctttgtttccagtgtgctcatggacgaccaactactgtaccattggtgaacttg
gaagctttgcacaagcagctgtccgaccttggaaccttgaataatcagttcgaggaggaa
tggcatgggttgaaaagaagtaaaccgagtctagaacgtgccaagcttcagttaagtact
gcaaagattcagagaggaacagattga
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