Amborella trichopoda: 18445679
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Entry
18445679 CDS
T02990
Name
(RefSeq) DDB1- and CUL4-associated factor 4
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18445679
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
18445679
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
TibC_1st
Motif
Other DBs
NCBI-GeneID:
18445679
NCBI-ProteinID:
XP_006855874
UniProt:
U5CVI7
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MPSDLPGFYFDPEKNRYFPIKRPGDKALFPDKTQKCVQPETERFRRTTCGTTKLLHTREL
SGKALINKRRSTDFRHEYQKLLASQPVVWKYKDVTYNALEKFHALVETPHGRKEACILAV
GNINGDISFFGVGVSEWYSDNAVECNSTRISPPANELVAEYGAPPSICGSIAPSVPLLSS
TSCIKKMASSHNDSCLSQHLLIATLGSGISGGSLYVLHLMDPVHNYERQRTPLQRRVSEV
FSTNHTIWTADVNSSGTKAAIGTNKGAGLVSLETGVLSWVCRSKSDILSQQFDQSGNIIF
CGFRNGAIAAIDARYKHTGLSGQSVVLPKQTIPYPSTKANLASIGDSNRFSKKYFQFKGN
LNPSGAIFMPSSICSLSLLQSEDHYLLASSMDGSIKLFDCRALQRGAVQSYDGHVNSHSL
IQLGVDPTGSILMCGGEDGHVRIWSVKSGELLYDSEISESVVHSVCWSHSIGDMSPWGSH
MQDHSWAAWLAPREGLFYVHGS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagatcttcctggtttttactttgatcccgagaagaataggtacttccccatc
aaacgtcctggggacaaagctctcttccccgacaaaacccagaagtgtgttcagccagaa
actgagaggtttaggaggacaacatgtggaacaactaaactgcttcatacaagggagttg
tctggtaaagccctcattaacaaaaggagaagtacagattttcgtcacgagtatcaaaag
ttactagcctcgcaacctgtggtttggaaatacaaggatgtaacttataatgctttagag
aagttccatgctctcgttgaaacacctcatggaagaaaggaagcatgcattttggcagtg
ggaaatataaatggcgacatcagtttttttggtgttggggtttctgaatggtattctgat
aatgccgtggaatgtaactcgactcgtataagtcctcctgctaatgaattagtggccgag
tacggtgcacctccttctatctgtggttcgatagcaccatcggtacccttgttatccagt
acatcgtgtataaagaagatggcatcgtctcataacgactcatgtctctctcagcatcta
ttaattgcaactcttggttcaggaatatcagggggatccctctatgttttacatttgatg
gacccggtacacaactatgaaagacagaggacgcccttgcaaagaagggtttctgaagtt
ttctctactaatcacacgatatggactgctgatgttaattcaagtggaacaaaagcggcg
attggtacgaacaaaggagctggtttagtaagtttggaaactggtgtactttcctgggta
tgtcgtagtaaaagtgacattctctctcagcagtttgatcaatcgggtaatattatattt
tgtggttttagaaatggagcaattgccgcaatcgatgctcgctataaacacacaggactt
tctgggcaatctgtggtacttccaaagcagactattccttatccttctactaaagccaat
ctggcttctattggagacagcaatcgattttccaagaagtactttcagtttaagggaaat
ctgaatccctctggtgctatattcatgccatcttcaatttgcagcttgtcattgcttcaa
tctgaagaccattacttgttggctagctctatggatggatctattaaacttttcgattgt
cgtgcactacaaagaggagctgtacagtcttacgatggacatgtgaattcccatagtctc
atacagcttggtgtggatccaacaggatcaattctaatgtgcggtggggaggatggtcac
gtacgtatatggagtgtcaagagtggggaattgttgtatgattcagagatctcagaatct
gttgtccattccgtgtgctggtcgcattctattggagatatgtctccgtggggatcccac
atgcaggaccatagttgggctgcatggcttgcccctcgtgaaggattattctatgtgcat
gggtcatga
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