Amborella trichopoda: 18445704
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Entry
18445704 CDS
T02990
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
atr
Amborella trichopoda
Pathway
atr00500
Starch and sucrose metabolism
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
Module
atr_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
18445704
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
atr01003
]
18445704
Enzymes [BR:
atr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
18445704
Glycosyltransferases [BR:
atr01003
]
Polysaccharide
Storage polysaccharide
18445704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glyco_trans_4_4
Glyco_trans_1_4
Glycos_transf_1
Peptidase_M2
Motif
Other DBs
NCBI-GeneID:
18445704
NCBI-ProteinID:
XP_011627602
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MEICLRPPRPWSCREPFSEGKLLKLKVCPTYGHHQPLHLSPWRKEPTYYRIPFCILIRAD
YSRRRQRKSPTSKSKGPTHPASKGFYRGPMPLSQAKTSGQKKVQIVKEEEEDPDISNSSE
NVDSLEEMVQASCESNSYLGHNKRTHEIKENGSETLGTESVVMDGEKTRLVTNSKDVEDV
EEIGGEIGSRGKQVDTKLDSEQIIGRGDKGGDEKPGMGGASEETNLRAQEMAHKRLLADL
ADENRLNGNKVFTYPKVAKSNQDIEVFLDRSMTSLGNESNLYIMGAFNDWRWKSFTKELS
KMDFPGDWWSCRVHIPKEAYKMDFVFLNGRDIYENNNSKDFEVPVEGGMDTFAFEDFLLE
ERRRELEKLAAEQAAKERKAAEQRRLEEEKAANDEDKAQAKIEVEKRREKINHIKHKAVL
SVDNLWSMEPFEFKGGDKVRLYYNCASRPVAHSKEVWIHGGYNNWQGGISIVEILSTAGI
EDGDWWYAYVIVPDGALLLDWVFADGPPGSAGVYDNNDFQDFHAIVPRATPEGLYWAEEE
HRIYRELQQERKLREDAKRAKAERTAVMKTETKEKTRKIFLLSQRNIVCTEPLDVQAGRP
VTVFYNPSNTVLSGKPEVWFKCSFNRWAHRLGPLPPQKMIAVDGGSHVKATVKVPLDAYM
MDFVFCEREDGGAYDNKNGMDYHIPVVGGVMKEPPMHVVHVAVEMAPIAKVGGLGDVVTS
LSRAVQDLGHAVDIILPKYDCLNLSKVKDFRFHSEYSWGGCQIKVWFGKVESLSVYFIEP
QNGMFWAGCIYGCRTDGDRFAFFCHAALEFLVQSDFQPDIVHCHDWSSAPVSWLIKDNYK
HYGLSNARVVFTIHNLEFGTNLISKAMAYADKATTVSFTYSKEVSMNPAIAPHLHKFHGI
LNGIDPDIWDPFNDPFIPMSYTSDNVVEGKRAAKDALQQLLGLKKSDHPLVGIITRLTVQ
KGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQGEFSDLANQLHNIHGDRARLCLTYDEPL
SHLIYAGADFTLVPSLFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKQRAQVQG
LEPNGFNFDGADFAGVDYALNRAISIWYESRDWFYSLCKRVMEQDWSWNRPALDYMELYH
AARKD
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggagatatgtctgcgacccccacggccatggagttgcagagaacctttctcggaaggg
aaacttctgaagctcaaagtttgtcctacttatgggcatcatcaaccattgcatctgtca
ccttggcgcaaagaacccacatactacaggatacctttctgcattctaatacgtgcagat
tattccaggaggcgacagagaaagagcccaacatctaagtccaagggtccaacccatcct
gcctctaaggggttctaccggggtcctatgccattgtcacaggccaaaacaagtggtcaa
aagaaggttcaaatcgtcaaggaagaagaagaggaccctgatatttcaaattcaagtgaa
aatgtcgacagtctagaggagatggtgcaagcttcttgtgagagcaattcctatcttggt
cacaacaagaggacacatgaaatcaaagaaaatggcagtgaaaccttggggactgaatct
gtggtgatggatggagagaaaacaaggcttgttaccaattctaaagacgttgaggacgtg
gaggaaataggtggtgagattggaagtagagggaaacaggttgatacaaagcttgacagt
gaacaaattataggtcgaggagataagggaggggatgagaagccaggcatgggaggggca
tctgaagaaacaaatttgagggctcaggaaatggcacacaagcggctgcttgctgatctt
gcagacgagaaccgcttaaatggaaataaagtgtttacataccctaaagtggcaaaatca
aatcaagatattgaagtctttctggacagaagcatgacctctttgggaaatgaatcaaac
ctttatataatgggagcatttaatgattggagatggaaatcttttaccaaggagctgagc
aaaatggattttccaggggattggtggtcttgccgagttcacattccaaaggaagcatac
aagatggattttgtgttcttaaatgggagagatatatatgagaataataactccaaggat
tttgaagtaccagttgaaggtggcatggacacctttgcttttgaggattttttacttgag
gagaggagaagggagcttgagaaacttgcagcagagcaagctgcgaaggaaaggaaagca
gctgagcaacgccgactagaggaagagaaggctgctaatgatgaagataaagcacaagca
aagattgaggtggagaagaggagagaaaagataaaccatataaagcataaggctgttctg
tctgttgataatttgtggtctatggaaccttttgagttcaaaggtggggacaaggttaga
ttatattacaactgtgcctctcgtccggttgctcattccaaagaggtatggattcatggg
ggttataataattggcagggaggtatatcgattgttgaaatcctatccactgctggaata
gaagatggcgactggtggtatgcgtacgtcatagtaccagatggtgctctacttctggac
tgggtttttgctgatgggcctccagggagtgctggtgtatatgacaataatgactttcag
gattttcatgcaattgtaccaagagccacacctgaaggtctttattgggctgaagaagag
catcgaatctatagggaactgcagcaagaaaggaagctgagagaagatgcaaaacgtgca
aaggcggagagaactgctgttatgaaaactgaaactaaggagaaaacaagaaaaatcttc
ctactgtcacagaggaatatagtttgtactgagccacttgatgtccaagcaggcagacca
gtgacagttttttataatccttccaatacagttttgagtgggaaaccagaggtctggttt
aagtgctcattcaatcgctgggcgcatcgtctgggtcctctaccacctcagaaaatgatt
gctgttgatggtggctcccatgtgaaagcaacagttaaggttcctcttgatgcttatatg
atggactttgtcttttgtgagagggaggatggtggggcttatgacaacaaaaatggcatg
gactaccatattcctgtcgttgggggggttatgaaagagcccccaatgcatgttgttcat
gtagctgttgaaatggcacctattgcaaaggttgggggtctgggagatgttgtgacaagt
ctttctcgtgctgttcaggacttgggacatgctgttgatataattcttccaaaatatgat
tgtttaaatcttagcaaggtgaaagacttcagattccattctgaatattcttgggggggt
tgtcaaatcaaagtttggtttgggaaggtcgagagtctttctgtgtacttcatagagccc
caaaatggaatgttctgggctggttgtatctatggatgtaggactgatggtgacagattt
gccttcttctgccatgcggcacttgaatttctagttcagagtgactttcagcctgatatt
gtacattgccacgactggtcaagtgcacctgtttcatggttaattaaggacaattacaag
cattatggtctcagcaatgcacgagttgttttcacaattcataaccttgagtttggcacc
aatttgatcagcaaagcgatggcatatgcagataaggctacaacggtttcgtttacgtac
tcaaaagaagtttcaatgaatcctgccattgcccctcacctccacaagtttcatggtatt
cttaatgggatagatccagatatctgggatccatttaatgatccttttatacctatgtct
tacacttcagacaatgttgtggaagggaaaagggctgctaaggatgccttacagcaactg
cttggcttaaagaaatctgatcaccctttagtaggtatcattacccgtttgactgttcag
aaaggtattcaccttatcaaacatgctatttggcgaacccttgaacgtaatggacaggtt
gttttgcttggttcagctccagatccccgcatacaaggggaatttagtgacttagcaaat
cagttacataacattcatggggaccgtgctcgcctttgtttgacctatgatgaacctctt
tctcacttgatttatgcaggtgcagatttcactttagttccttcactttttgaaccatgt
gggttaactcaattggtagccatgcgttatggatccatccccgttgttcgtaagacagga
ggactttatgatactgtatttgatgttgaccatgacaaacagcgagcgcaagtacaaggt
cttgaacctaatggcttcaattttgatggagctgattttgctggggttgattatgctctc
aatagagcaatttccatctggtatgaatctcgtgattggttttactctctttgcaagcgt
gtgatggagcaagattggtcttggaaccgtccagccttggactatatggagctctaccat
gcagcccgtaaagattga
DBGET
integrated database retrieval system
