Amborella trichopoda: 18445785
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Entry
18445785 CDS
T02990
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18445785
03012 Translation factors [BR:
atr03012
]
18445785
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
18445785
Translation factors [BR:
atr03012
]
Eukaryotic type
Initiation factors
eIF-3
18445785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
RRM_1
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_ELP1_1st
Beta-prop_WDR19_1st
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
18445785
NCBI-ProteinID:
XP_006855977
UniProt:
U5D4S3
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MAEAMELPLPAHHLGSSSLIDVSKIDISNIDLDSIHLPPGDDFGIPSDDDVVAEEELEFD
SGFGSIIIVDNLPVVAPEKYEKLEIVIRKIFGQIGVIREGGLCMPVDQETKKTKGYCFIE
YSTPQEAQTAKDQTNGYKLDKSHVFAVYLFDEFDKYVNVPDEWVPPEIKPYTPGENLHHW
LTDEKARDQFVIRAGSDTEVLWNDPRQLKPELVYRRAFWTESFVQWSPLGTYLATVHRQG
AAVWGGAATFNRLMRYAHPLVKLIDFSPGEKYLVTYSSHEPSNPRDSQKVALVIFDVRTG
KVLREFKGSADDFATGGTGGVSGVSWPVFRWSGGREDKYFARIGKNAISVYETETFSLLD
KKSIKVENVMDFSWSPTDPILVLFVPEGGGGNQPARVSLVQIPGREELRQKNLFSVSDCS
MFWQSNGEYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPK
GHRFAVIHGENPRPDVSFYSMRSGRVSKLTTIKGKQANALYWSPAGRFIILAGLKGLNGQ
LEFYNVDELETMAVGEHFMATDVEWDPTGRYVATSVTSVHEMENGFNIWSFHGKLLYRIS
RDHFYQFLWRPRPASFLTLEKEEEIAKNLKKYSKRYEAEDQDVSLLLSEQDREKRRQLQE
EWDRWVKEWKRLHEEEKALREELRDGEASDEEEEYEAKEVEVEEILDVTEEVLSSYSYE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagccatggaattgccattaccagctcaccacctgggctcttcttcactcatt
gacgtctccaagatcgacatctcaaacatcgatctcgactccatccatctcccacctggt
gacgacttcggcataccaagtgatgatgatgtggttgcggaagaagagttggaattcgac
tctggtttcggaagcataataattgttgataatctcccagttgttgctcctgagaagtat
gagaagcttgaaattgttatacgaaagatatttggtcagattggtgtgattagagaagga
gggctttgcatgcctgttgatcaggagacgaagaagaccaaaggatattgcttcatcgag
tacagcactccacaggaagcacagacagctaaggaccagacaaatggttataagttggac
aagtcacatgtatttgctgtgtacctatttgatgaatttgacaaatacgtgaatgttcct
gatgagtgggttcctcctgaaataaaaccttacacacctggggagaacctacatcattgg
cttacagatgagaaagctcgagatcaatttgttattcgggcgggttctgacactgaggtt
ctatggaatgatcctaggcaattgaagcccgagctggtttatcgacgtgctttctggacg
gagagttttgttcaatggtctccacttgggacatacttggcgactgtacacaggcagggg
gcagctgtttggggaggtgccgctacgtttaaccgtttaatgcgttatgcccatcccctg
gttaaacttattgatttctcacctggggagaaatatctagtcacgtacagtagccatgaa
cccagcaatcctcgggactcacagaaagttgctctggttatttttgatgtgcgaactgga
aaagtattgagagaatttaaaggtagtgctgatgattttgccactggtggaactggaggt
gtgtctggtgtctcatggcctgtgttcagatggagcggaggaagggaagacaaatacttt
gcgagaattggaaaaaatgcgatcagtgtctatgaaacagagacttttagtcttcttgat
aagaaatctattaaagtagagaatgtcatggacttcagttggtctccaactgatcccata
ttggtactctttgtccctgaaggtggtggtgggaatcaaccagcaagagttagtctcgtt
caaattcctggacgagaggaattgaggcagaagaacctgttcagtgttagtgactgtagt
atgttctggcaaagcaatggagagtatcttgctgtaaaagtagaccggtacacgaagacc
aagaagagcacatacactggatttgagctctttcgcataaaggagagggacattccgatt
gaggttttggagcttgaaaacaagaatgacaagatcattgccttcgcgtgggagcccaaa
ggccacaggtttgcggtgattcatggagaaaaccccagaccagatgtgagcttctattct
atgcgaagtggccgggtctcaaaactcacgacaataaaaggcaagcaagcgaatgccctg
tattggtcacctgctggtcgatttatcatccttgctggcttgaaaggtttgaatgggcag
cttgaattctacaatgttgatgagcttgagaccatggctgttggtgaacatttcatggcc
actgacgttgagtgggatcctactggaagatatgtagcaacatccgttacttctgtgcat
gaaatggaaaatggattcaacatctggtctttccacgggaagcttttatacaggatctca
agagaccacttctatcagttcttgtggcggccaaggcctgcttcattcctgactcttgag
aaagaagaggagattgcaaagaacctcaagaagtacagcaaaagatatgaagcggaggac
caggatgtctcattgttgctcagtgagcaggacagggagaagaggaggcagcttcaggaa
gaatgggacaggtgggttaaagagtggaagcggctgcacgaagaagagaaggctttgagg
gaagagttgagagatggggaggcgagtgatgaggaggaagagtacgaggcaaaggaagtg
gaggtcgaggaaatcttggatgttacagaagaggttctgtcctcttatagctatgagtaa
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