Amborella trichopoda: 18445843
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Entry
18445843 CDS
T02990
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18445843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18445843
Spliceosome [BR:
atr03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
18445843
Complex B
18445843
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
18445843
NCBI-ProteinID:
XP_006856031
UniProt:
U5DAR8
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MGDYGDVYMRNRDAAVQARTKAQNRANVLQLKLIGQSHPTGLTSNLLKLFEPRPPLEYKP
PPEKRKCPPYSGMAQYVSNFAEPGDPEYAPPVQKAETPTQRRARIHGLRLEKGAAKAAEE
LQKYDPTKDPNISGDPYKTLFVARLNYETTEHRIKREFEAYGPIKRVRLIHDKTTNKPRG
YAFIEYVHTRDMKTAYKQADGRKLDNRRVLVDVERGRTVPNWRPRRLGGGLGSTRVGGEE
VNQKYSGREPQQATGGSRSEEPRSRDDRHVSREREVDRVRDRDRDREKSQERSHERVTRD
RDDRHHRDRDRDRERERERERGRNYRDRERPRERERERSYDRRDRDRDRDRERPRERERE
RSYDRERPRDRERDNEERDKHWGREREYDHLDDDKPRDVDYHDGHTGHENEHDHGWDREY
DDRMEAEDDDDRDHERERDREREHGIVEPDEHDQGWER
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgggggactatggagatgtttacatgcgcaacagagatgcagctgttcaagctcgcact
aaagcacaaaatagagcaaatgttttgcagctaaagctgattgggcagagtcatccaact
gggttaacatcgaaccttttgaagctttttgaacctagacctcctttggagtataagcct
cctccagagaagagaaaatgcccaccttattcaggaatggcacagtatgtgagtaacttt
gcagagccgggtgacccagaatatgcaccgccggttcagaaggctgaaactccaacacaa
agaagggcacgaatccacggacttcggcttgagaaaggcgctgccaaagctgccgaagag
ctgcagaaatatgatcctacaaaggaccctaatatatctggagatccatacaaaacactg
tttgttgcaaggcttaattatgaaacaaccgagcaccgaatcaaaagggagtttgaggcc
tatgggccaatcaagcgggttcgtctcatccatgacaaaactacgaataagcctcgtggt
tatgcattcattgagtacgtgcacacccgtgacatgaagactgcatacaaacaagcagat
ggtcggaagctggataatagaagggtacttgtcgatgttgagcgtggtagaactgttcca
aattggcgtcctcgcagactgggtggtggacttggatcaactagggtgggaggtgaagaa
gttaatcagaagtactctggcagggaacctcagcaagccacaggaggatcacgttctgag
gaaccgaggtcacgagatgatcgccacgtttctagggagagggaagtggaccgggtaaga
gatagggatcgcgacagggagaagtcacaagagcggtcccacgagcgggtgacccgagac
cgagatgacagacaccatagggaccgcgatagagatagagagagagaaagggaaagagag
cgtggtcgtaactatcgtgaccgtgaaaggcctagagagcgagagagggagagatcatat
gatcggcgtgatcgtgaccgtgaccgtgaccgtgagaggcctagagagagagagagggag
aggtcttatgaccgtgaaaggcctagagatagagagagggacaatgaggagagagataag
cactggggcagagaaagggagtatgaccatttggatgacgataagcctagggatgtggac
tatcatgatgggcatactgggcatgagaatgaacacgatcatggctgggatagggagtat
gatgaccgtatggaggctgaggatgacgacgatcgcgatcatgagagggaaagggataga
gagagagagcatgggatagtggagcctgatgaacatgatcaaggttgggagcgctaa
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