Amborella trichopoda: 18445967
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Entry
18445967 CDS
T02990
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18445967
Enzymes [BR:
atr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
18445967
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
18445967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
IBR_1
Rcat_RNF216
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
18445967
NCBI-ProteinID:
XP_011627725
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MADFETSDDDYYGDDSLDGLDQEEDDLLWTPQRTPSSASKVITRASLLAAQREDLKRVTE
MLTLKEHHARTLLIHHRWDVERLLAVLVEKGRDRLFTEAGIPILDAAHQASARSTSSIMC
NICMEDISPNDVTTMDCGHCFCNDCWTEHFIIKIKEGESRRVRCMAHKCNAICDEAIIRN
LVSVKDPEVAERFERFLLESYIEDNGKVKWCPSVPHCGNAIRIDGDSYCEVECTCGLQFC
FRCSSEAHSPCSCLMWELWIKKCKDESETVNWLTVHTKPCPKCHKPVEKNGGCNLVTCLC
GQYFCWLCGGATGRDHTWTGIAGHSCGRYKSDHNKVAERAKRDLNRYMHYHNRYKAHMDS
MKRENKLRETVQATIATSESKDDGFRDYSWVTNGLNRLFRSRRVLSYSYPFAFYMFGDDL
FKDDMTEEERQLKQNLFEDQQQQLEVTVERLSKFIEEKFDKLPEDKVKEIRMHIINLTVL
VDTCCKNMYECIENDLLGLLQSTTHSIAPYTSKGIERASELSVCPDSDQILNSSKANDDD
AHDPSWVSSAPGTGEISTKIRIEKERALSIKSLCDRENCCTDSEPRSEGQVSCASLDDNG
CSSRKRAREETLGSLLFDLNLPAEVIDKRV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttcgagaccagcgatgatgattactatggcgatgactcacttgatggattg
gatcaagaggaagacgatctcttatggactccacagagaaccccttctagtgcttctaag
gttatcaccagggcatctcttcttgctgcccagagggaagatttgaagagagtaacagaa
atgctgacactcaaggagcatcatgctcgtactctactcatccatcatcgatgggatgtt
gagaggttactagctgtgcttgtagagaagggaagagatcggttattcactgaagctggt
attccaatcttagatgcagcgcatcaggcctctgcacgttccacatcatcaataatgtgc
aatatatgcatggaggacatatctcccaatgatgttactactatggattgtggacattgt
ttctgcaatgattgttggacggaacattttattattaaaataaaggagggagaaagtcgg
cgtgtaagatgcatggcacacaagtgcaatgcaatttgtgatgaggcgataataagaaac
ctagttagcgtgaaggatcctgaggtggcagagcgttttgaacggtttcttcttgagtcg
tatattgaagataatggcaaggtcaagtggtgcccaagtgttccacattgtggaaatgca
attcgtattgatggtgatagctattgtgaggtggaatgcacatgtggtcttcagttttgc
ttcagatgctcatctgaggcacactctccttgttcgtgtttgatgtgggagctatggatt
aagaaatgtaaggatgaatcagagacggtcaactggcttacagttcacactaagccttgc
ccgaagtgtcacaagccagtggagaaaaatggtggctgcaacttagtgacttgcttatgt
gggcagtatttttgttggttatgtggtggtgctactggtcgtgatcacacctggacaggc
attgctggccacagttgtggacgctacaaatcagatcataataaagtggcagagagggcc
aaaagagatcttaatcgttacatgcactaccacaatcgttacaaagctcacatggattcc
atgaagcgtgaaaacaagcttagagaaactgtccaagcaacaatagcaacctcagaaagc
aaggacgatggatttagggattacagttgggtgacaaatgggctaaacaggctcttcaga
tcaaggcgtgtcctttcctactcatacccctttgctttctacatgtttggagatgaccta
tttaaagatgatatgactgaagaggagagacaattgaagcaaaacctgtttgaggatcag
cagcagcagctggaggtgacagtggagcgtctgtccaagtttattgaggagaaatttgac
aagctccctgaggacaaagtcaaggaaattcgaatgcatataatcaatctgaccgttctt
gttgatacctgctgcaagaacatgtatgaatgcattgaaaatgatctattgggtttgctc
cagtcgacaactcatagcattgcgccttacacatcaaagggtatagagagagcatctgag
ctttcggtttgcccagattctgatcaaatattgaacagctcaaaggctaatgatgatgat
gctcatgacccttcttgggtttcaagtgcacctggtactggtgaaatttctacgaaaatt
aggatcgagaaagagagagcattatctatcaaaagcttatgtgatagagaaaattgttgc
acagattcagagcctcgttctgaaggccaagtctcctgtgcaagcctggatgataacggg
tgctctagtaggaagcgggcccgtgaagaaaccctaggaagcctcctttttgacctcaac
ctacctgctgaggtaatcgataagagggtttaa
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