Amborella trichopoda: 18446054
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Entry
18446054 CDS
T02990
Name
(RefSeq) nuclear pore complex protein NUP58 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
atr
Amborella trichopoda
Pathway
atr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18446054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18446054
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18446054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
DUF2491
Motif
Other DBs
NCBI-GeneID:
18446054
NCBI-ProteinID:
XP_011627745
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MAFSFGNQSPLQQTTPLIQQNYAFPQQQQQQQVQQQMYLFTNEKAPASYQTTWSDLHPES
QKLLLEIEERILEYRVESQRLDQCSRLYDTSVSNDAFELDACHIIQELGGISTAMEREKI
LLQELMSVVKGMMRNTEVAVWSFMMLHPRFVHTRGSTTTHSSTPPISGAMTHANPNTQQK
ATSVVPVIDYYSGIPRRPSPFLQHTVARFEKYLAECRQWIEELEQLLLRGSDENGNGNTD
LTLLDSLPAVMSNVHDFFVHVAAKVETLHQHMESMRAAYLADQRRRGEGNDPFLEADRRE
TAKQEVAARRVHPTLHLPSLPQPLTQVAGLFACSSTPSSSFPGASSSTPIMAGGTSSGFS
LFNTPTSASTSTSNLSSSLFATPNLQATPFASSRLSQSSSLFGTPTTPSLFGSSSTPSLL
GSAPSIATPAFGSLPFTSTPAIGPGTGLSFGATTKSTKPKARTARR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccttctctttcggtaaccagtctcctctgcaacaaaccacgcctctaattcaacaa
aactatgcctttcctcaacaacaacagcagcaacaggtgcaacaacaaatgtatctcttc
accaatgagaaggctcctgcatcttatcagactacatggtcggatcttcatccggagtcg
cagaagctcctgctcgaaattgaggagcggatcttggagtacagggttgaaagccagagg
ttggatcagtgtagtcggttatatgatacctcagtctccaatgatgcatttgagcttgat
gcttgtcatataattcaggaacttggaggaatcagtacagctatggagagagagaaaatc
ctactgcaggaactgatgagtgttgtaaagggtatgatgagaaacacagaggttgcagtt
tggtcatttatgatgctccatccaaggtttgttcatacgcgtggttcaactacaacacat
agcagcactccaccgatttcaggagcaatgacgcatgcaaacccgaatacccaacaaaag
gccacttctgttgtaccagttatagattactatagtgggattcctcggaggccctcccct
ttcttgcaacatacagttgccagatttgaaaaatatcttgcagagtgtcgacaatggatt
gaagagttagagcagctcctcttaagggggtctgatgaaaatgggaatggcaacacagac
ttaaccttgttggactctctacctgcagtgatgtcaaatgtgcatgatttctttgttcat
gtggctgccaaggttgagactcttcatcagcatatggaatcaatgcgagctgcatatctt
gcagaccaacgtcgtagaggagagggtaacgatccatttcttgaggccgataggagggaa
actgccaaacaagaagtagcagctagaagagtccatcctactttgcacttgccttcactt
ccccaaccattaacacaagttgctggtctcttcgcttgctcatcaaccccttcatcttcc
tttccaggagcctcgtcatccactcccataatggctggaggaacttctagtggtttttct
ctctttaacaccccaacctcggcttccacttcaacctcaaacttatcttcttctttattc
gccacacccaatttgcaggccaccccttttgcatcaagtcggttatcacagtcgtcttct
ttgtttggaaccccaacgacgccctctttgtttgggtcttcatcgacgccttctttgctt
gggagtgcgccatccattgctactccagcatttggaagcttgccattcacttcaacacca
gccatagggcctggaacagggttaagctttggggctaccactaaatccacgaagcctaaa
gctcgcaccgcacggcgttag
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