Amborella trichopoda: 18446701
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Entry
18446701 CDS
T02990
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18446701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18446701
Spliceosome [BR:
atr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
18446701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
18446701
NCBI-ProteinID:
XP_006856873
UniProt:
U5D7W6
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MGGKIEEADVNGDLSSSPELKRQKVGHHEMNPTTENTHSSLLPLASYYSEEEEEDDDDRE
GREEEGNRENGSLFHGQRQKQVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL
VCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTERVYCLPDGYEVNDPSLDDIRHVLNPRF
NREQVDHIDTNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE
NYQNCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSDPVEFMS
WLLNTLHTDLGGSKRPNGSIIYRCFQGELEVVKEIQNKQCSEKKENGDQQNKASVSQEGT
VVENVLRETNRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGESVTEVVRPH
LARMRYRVIRLPQYLILHMRRFTKNNFFMEKNPTIVNFPVKNLELKDYIPLPTPNDNERL
RSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYMQIYE
QQQQ
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggagggaagatagaagaagcagatgttaatggagatttatcatcctccccagagttg
aagaggcagaaagtaggtcaccacgagatgaatccaacaactgagaacacccattcaagt
ctcctacctttggcttcttattactctgaagaagaggaagaggacgatgatgacagagaa
ggaagagaagaagaggggaacagagagaatgggagtttatttcacgggcagcgacaaaag
caagttgaggttcgaagggattgcccttatttggatacagtcaatcgccaggtcttggac
tttgattttgagaagttctgctctgtttctctgtcaaacttaaatgtatatgcttgcttg
gtttgtgggaaatactaccaaggaaggggcaaaaagtcacatgcatatacacatagtctt
gaagcaggtcaccatgtctatatcaatctacgaaccgagagggtctactgtcttcctgat
ggatatgaagttaatgatccatcactagatgatattcgccatgtcctaaacccaagattt
aatagagagcaggtcgaccatattgatacaaataaacaatggtcaagggctcttgatggt
tcagactatcttcctggaatggttggactcaataacatcaaggaaacagatttcgttaat
gttactattcaatcactgatgcgtgtaaccccattaaggaacttctttctcattcctgaa
aactatcagaattgcagatctcctcttgttcatcgattcggagaacttacacggaagata
tggcatgctcgcaactttaagggacaggtgagtccccatgaattcctccaggcagttatg
aaagccagtaaaaagcggtttagaattggggtgcagtcagatccagttgagtttatgtcc
tggcttctgaatacactgcatacagatcttgggggttctaagaggcccaacggcagcatt
atataccggtgctttcagggggagttggaagttgtgaaggaaattcaaaataaacagtgt
tctgagaagaaagaaaatggtgatcagcagaataaagcttctgtttcacaagagggaaca
gtggtggagaatgttctcagagagactaaccgaatgccattcttaatgctcgggcttgat
ttaccccctcctccacttttcaaagatgtcatggagaaaaatataattccacaggttccc
cttttcaacatactaaagaagtttgatggtgaatcagtcactgaagttgtgagacctcat
cttgccaggatgagatatcgtgtaatcaggttaccccagtatttgattctccatatgagg
agatttacaaagaacaatttctttatggaaaagaatccaactattgtgaactttcctgtg
aaaaaccttgagcttaaagattatattccattaccaacacctaatgataacgagagattg
aggtcaaaatatgatctgatcgcaaacattgtacatgatggaaagcctggagaaggatct
tacagggtgtttgtgcaaagaaaatcagaagaattatggtatgaaatgcaagacttgcat
gtgtcagaaactcttcctcaaatggttgccctctcagaggcttatatgcagatttatgag
cagcagcagcagtga
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