Amborella trichopoda: 18446791
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Entry
18446791 CDS
T02990
Name
(RefSeq) chlorophyll a-b binding protein of LHCII type 1
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
atr
Amborella trichopoda
Pathway
atr00196
Photosynthesis - antenna proteins
atr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
18446791
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
atr00194
]
18446791
Photosynthesis proteins [BR:
atr00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
18446791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
18446791
NCBI-ProteinID:
XP_006856963
UniProt:
U5D860
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MATMSLSSSTFAGKALALSPASSELLGSGEGRVSMRKPVGKPSKAVSSGSPWYGPDRVKY
LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
LSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRIA
GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
PLENLADHLADPVNNNAWAYATNFVPGK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatgtcactttcttcttctaccttcgcaggcaaggccctcgccctctcccct
gcctcctcagagctccttggctccggggaggggcgagtgagcatgcgaaagccggttggc
aagccctcaaaggccgtctcctctgggagcccatggtatggccccgaccgcgtaaaatac
ttgggccccttatccggggaacccccatcatacctcactggtgagttccctggcgactac
ggctgggacactgcaggcctctcggctgacccagagacatttgcgaagaacagagaattg
gaggtcatccactgccgatgggcaatgctgggggccttgggctgtgtcttccctgagctg
ctctcccgcaatggggtgaagtttggggaggcagtgtggttcaaggcgggggcacagatc
tttagcgagggagggctcgactacctgggaaatccgagcctggtgcacgcacagagcatc
ttggcaatatgggcctcccaggtcattctcatgggtgcggttgagggataccgcattgca
gggggcccactcggggaggtgaccgatccactctaccccgggggcagcttcgatcccttg
gggctggcagatgacccagaggcttttgcggagctgaaggtgaaggagattaagaacggg
cgtcttgccatgttctccatgttcggcttctttgtgcaggccattgtcactggaaaaggg
cccctcgagaacctggccgaccacctcgcagaccctgttaacaacaacgcctgggcctac
gccaccaactttgtgcctggaaagtga
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