Amborella trichopoda: 18446907
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Entry
18446907 CDS
T02990
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
atr
Amborella trichopoda
Pathway
atr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18446907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18446907
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
18446907
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_Nup35
RRM_3
Motif
Other DBs
NCBI-GeneID:
18446907
NCBI-ProteinID:
XP_006857074
UniProt:
U5CYZ7
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MDSDQGKLFVGGISWETNEEILKDHFKQYGEVLDAVIMRDRNTGSARGFGFVVFSDSNVA
DKALQEKHVIAGRTVEVKKAVPRGEQQNSALNKNNNNSGTNSNNNGTTNSTSQFRTKKIF
VGGLSANLTENEFRSYFEKFGRITDVVVMYDSATHRPRGFGFITFDSEDAVENVMQESFH
HLNNKRVEVKRAVPKDGSQSQNRGQSRSPMYSSFNNNAPIGVYPSYTPRYGVYPGYGHVS
TYLNTRGGYPAYYAIGGYGGIPQAPYGPGFANGPPVGPPRSPWNGATIVGPRQCPAPFTN
AVYGYGGDAMGGYGGHHGYVKAGGYVGMGGYGGMMAHGNGNHNQGASPRVDGGKFEENSN
GYGGAARQNQRGQEQRFRPYADRVA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaccagggaaagctatttgttgggggcatctcatgggaaacaaatgaagaa
atacttaaagatcacttcaagcaatatggtgaagttcttgatgcggttataatgcgagat
aggaacacaggtagtgcaagagggtttgggttcgttgtgttttcagattccaatgttgca
gacaaagccctccaagaaaagcatgttattgcagggagaacagtggaggtgaaaaaggca
gttccgaggggtgagcagcaaaactctgctttgaataagaacaataacaacagtggcacc
aacagcaacaacaatggcaccactaatagtacatctcagtttaggaccaagaagattttt
gtagggggtttatctgctaatttaacagagaacgaattcaggagttactttgagaaattt
ggtaggatcacagatgtagttgtcatgtatgattcagcgactcataggcctcgaggattc
ggtttcataacattcgattccgaagacgcagttgaaaatgttatgcaagagagttttcat
cacttaaacaataaacgagtcgaggttaagagagcagttccgaaagacggaagccaaagc
cagaacagaggtcaaagtaggagcccgatgtatagtagctttaataacaatgccccaatt
ggggtttacccatcttatacccctagatatggagtttaccctggttatggtcatgtgtct
acataccttaacactaggggtggttaccctgcatattatgctataggaggttacggtggt
attcctcaagccccttatgggcctgggtttgctaatggcccccctgttggaccccctaga
agtccatggaatggtgctactattgtggggccaaggcaatgccctgctccctttactaat
gctgtttatggttatgggggtgatgccatggggggctatggtgggcatcatgggtatgtt
aaagcgggtggttatgtcggcatgggtggttatggtgggatgatggctcatggaaatggt
aatcataatcaaggtgctagccctagggttgatggtgggaaatttgaggagaattcgaat
ggttatggtggggcagcgaggcaaaaccagaggggacaggagcagcgttttaggccctat
gcagatcgtgttgcttga
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integrated database retrieval system
