Amborella trichopoda: 18447059
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Entry
18447059 CDS
T02990
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X2
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atr01002
]
18447059
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18447059
Enzymes [BR:
atr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
18447059
Peptidases and inhibitors [BR:
atr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
18447059
Ubiquitin system [BR:
atr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
18447059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
V1R
Motif
Other DBs
NCBI-GeneID:
18447059
NCBI-ProteinID:
XP_006857223
UniProt:
U5D8Z9
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
MAGFISNGDGSTHQSSHGDGFSMPSSINPLFQRRIAFHPARKAYSVSSNGDFHLEILNPS
VEQQKPVSNMAMVPPVAKKLENSDHHELSLDPDLNLGIGFHRIGAGLANLGNTCFLNSVL
QCLTYTEPLAAYLQSGKHKSSCHMAGFCAMCAIQNHVMSALRSSGKILSPNHLVRNLRCI
SRNFRNSRQEDAHEYMVNLMECMHKCCLPSGVLSESPGAYEKSLVHKIFGGRLQSQVKCT
QCSHESNTFDPFLDLSLEIVKADSVRKALAHFTAREQLDGGEKQYQCDRCNKKVRAFKQL
TIHKAPYVLTIHLKRFSPDGMGGKIDKMVQFGSNLELKPFVSGQYDVDLRYTLYGVLVHA
GWSTHSGHYYCFIRTSSGIWHALDDNRVYQVSEKFVLQQKAYMLFYVLDRKRSLQRKLVD
ATHRENGLASAMEKKGLHASSLNANAKESMKIASKENGLASAMEKSLLHISLPKVNSDAK
ERLKSGSNENGLESAMERNPLHISPSNANSNARESTRIDNTESTQFTAGHLSIMAELNGP
DCHAGSSSTVGAIEGNRFRASAENGNDNDSNHRDGSHMSEPAKSVKEANGRTSKGFSLEI
ANGDAKAQALTSNESHMSSKNNTPTPTMNGSLRTQAKTELVSEKEQHVHALRSPRLALEN
GIAKTETLASDGSHYSSSKNNTPAKNVSLRAQARSEHASIKEQDMCTLRSPRLDLDNGMA
KTETLTSDGSNHSLSKNNTSTKNGSLQPKTNDEHVSVKEPDMGTLKRPHLDVANGIAETQ
LSESDGSHHMPSKNSPAANGSIQAQGSSSTCFETKSNSPGKEGLKRKKCSSYPIIKGTSK
SLFLASLRPHKKKSRKKTKRLKKDIKSSTQDDFVGDDERRETCMNAAERDERGPPNSANG
SCHNGMKQKRGLGVVNDAKSSNDKHVKVKDGGVERLHQKNGMLAMEQTDNSKKRGLVQTS
STTLLATALSETTVGRWDGVETESPEIDRVIETRKTGIGYILDEWDEEYDRGKRKKLRNR
ELGLGENGANPFQDLYTKKTQPKPTKLRRNRSGNQPMRI
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtttatcagcaatggagatggatcgacccaccagagcagccatggcgatggg
ttctcaatgccttctagtataaaccctctttttcagagaagaatcgcgtttcaccccgcg
agaaaagcttattctgtttcctccaatggcgattttcatttggagattctcaatcctagt
gtagagcagcagaagcctgtttccaacatggctatggtgcctcctgtggcgaagaagctt
gaaaacagtgaccaccatgagctcagtttggacccggacctcaatcttggaattgggttt
catcggattggtgcgggtttggctaatctggggaacacttgctttcttaattcggttctt
caatgcctgacctatacggagccattagctgcttatttgcagagtgggaagcacaaatct
tcttgtcatatggctgggttctgtgcaatgtgtgccattcaaaatcatgttatgagtgct
ctacggtcgtctgggaaaatattatcacctaatcatcttgtgagaaatttgcggtgcata
tctcgcaattttcgcaattcaaggcaggaggatgcacatgaatacatggttaacttaatg
gaatgcatgcataagtgctgcttaccatctggtgttttgagcgagtctcctggtgcttat
gagaaaagcttggttcacaagatatttggtgggcgtctacagagtcaggtcaaatgcaca
cagtgttcccatgagtcaaacacatttgatccattcttggatttgagccttgaaatagtg
aaagcagattcagtgcggaaagcccttgcacattttacagctcgtgagcagttggatggt
ggagagaaacaataccaatgtgaccgctgcaataagaaggttcgagcttttaagcagctt
accattcacaaggcaccttatgtcctcacaattcatctgaagcggttcagtccagatggg
atgggagggaaaattgacaagatggttcagtttggatctaatttggaactaaagcccttt
gtcagtggtcaatatgatgtagatttgagatacacactttatggtgttcttgttcatgcc
ggttggagcacacattcaggtcactattattgctttattcgcacatcaagtggcatatgg
catgctctcgatgataatcgggtctatcaagtcagcgagaagtttgtgttgcaacagaag
gcatacatgctgttctatgtgcttgatagaaaaagatctctccagagaaaactagtggat
gctactcatagagaaaacggtttagcaagtgcaatggagaaaaagggacttcatgcttct
tcattaaatgccaatgcaaaagaaagcatgaagattgctagcaaggaaaatgggttggca
agtgcgatggagaaaagcctacttcatatttctttgccaaaagtgaattcagatgcaaaa
gaaaggttaaagtctggtagcaatgaaaatgggttagaaagcgcaatggagaggaacccg
cttcatatttctccatcaaatgcaaattccaatgcaagagaaagcacaaggattgacaac
acggagagtacccaattcactgcaggacatttgtcaattatggctgaactgaatggacct
gactgccatgctggctcctcttctacggtgggtgctattgaaggaaatagatttagggcc
tctgcagaaaatggcaatgacaacgatagcaatcaccgagatggttctcatatgagtgaa
ccagccaaaagtgtcaaggaagcgaatggtcgtacttcaaaagggttttccttggaaata
gcaaatggtgacgctaaagctcaggccttgacttcaaatgaatcccatatgtcttccaag
aacaacactcccactcccacaatgaatgggtcacttcgaactcaggcaaaaactgagctt
gtaagtgaaaaggaacaacatgttcatgctttgagaagccctcgcttggcattagaaaat
ggtattgctaaaactgagacactggcttctgatggatcccattactcatcatctaagaac
aacactcccgcaaagaatgtttcacttcgagcgcaggccagatctgagcatgcaagtatc
aaggagcaggacatgtgtactttgagaagccctcgcctggatttagacaatggtatggct
aaaactgagacattgacctcagatggatccaatcattccttgtctaagaacaacacctcc
acaaagaatgggtcccttcagcctaagaccaacgatgagcatgtaagtgtcaaggaacca
gacatgggtactttgaaaaggcctcatttggatgtcgcaaatggtattgctgaaactcag
ctatcagaatcagatggatctcatcacatgccttctaagaacagccctgcagcaaatgga
tccattcaggctcaggggtcatccagcacttgctttgaaaccaagagtaacagtcccggc
aaggaagggctcaagcgaaagaaatgcagtagctatcctatcataaagggcacgtctaag
agcttattccttgcatctttaagacctcataagaaaaagtcacgtaaaaaaactaagagg
ctcaagaaagatatcaagagctccactcaggatgactttgtgggtgatgatgaaaggagg
gagacttgcatgaacgctgctgagagagatgagagagggccaccaaacagtgcaaatgga
tcatgccataatggaatgaaacaaaagagaggtcttggcgtagtgaatgatgcaaaatct
tcaaatgataagcatgtgaaggtgaaagacgggggagtagagagattgcatcagaagaat
ggtatgctggccatggagcaaacagacaattcaaagaagagaggcttggttcagacttct
tctaccaccttgctagcaacggcactctcagaaaccactgttggccggtgggatggtgta
gaaacagagtcccctgagatcgatagagtgattgaaacacggaagactggcattggttat
atactggatgaatgggacgaggaatatgatcgtggtaagaggaaaaagcttaggaatcgg
gaactcggactgggagagaatggtgccaatccattccaagatttgtatacaaagaaaaca
cagccaaagccaaccaaattgagaaggaaccgatccgggaaccagcctatgaggatatga
DBGET
integrated database retrieval system
