KEGG   Amborella trichopoda: 18447285
Entry
18447285          CDS       T02990                                 
Name
(RefSeq) splicing factor U2af large subunit A
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
atr  Amborella trichopoda
Pathway
atr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18447285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atr03041]
    18447285
Spliceosome [BR:atr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    18447285
 Complex B
    18447285
SSDB
Motif
Pfam: RRM_1 RBD_DEAH11
Other DBs
NCBI-GeneID: 18447285
NCBI-ProteinID: XP_006857448
LinkDB
Position
Unknown
AA seq 930 aa
MKMAEVERLSGKSGILYELSRNERNEGTSARTRPLTIEDLILRRNNKKLLETFGERTIGK
TKKSVPETDATSDHSGSDTIHKRDSSSKDVKGKHDLDDSKKKGSSKKKNGRLPTKEDGYS
KGKEEKLHRDKGRDTGGKNEKHGHHRGKLDDHNTGSKKHHFSEVGVKDRHEERDKYKKES
KKKHKSESDEKYKLEKDGVVARKQEPSRREDDDYLEGNSRKKQSNQSSYHDETRPKRRRS
ESREPNRGRERRSVSLSPRSRKRTSYRGWGHDESTYYSIKERVGRHHSETERSRKGSNGS
SSNGHYRRHGNASGLGGYSPRKRRSEAAVRTPSPMVRSPERKSAAWDLPPVGLDTTGVIS
NVGSLQSSSSRQVVTSQTHELPKVVSFASSALNSSMLNSTKTGILIAENPFDSVQLTQAT
RPSRRLYLENIPASASDESVVECLNNFLLSSGAIRIKGTHPCISCLINKEKGQALVEFLT
PENATAALAFDGKSISGSIVKIRRPKDFIETPAVATEKPVATVDAVSDIVKDSPHKIFIG
GIPKSLSSDKLQEIVSVFGHLKAYHFEVNRESGGSCAFLEYTDQSITLKACAGLNGMKLG
GCVLTVVQAFPDVSAEEISKGPPSYGIPQHAKPLLKEPTQILKLKNVFNMDDLSESEIEE
SLEDIRIECTRFGTVKSVNIIRLSKSSEEAPNMTITTGNNDSPGPKQDPTQIMEKLDSVN
SDILGAKQDSLHELEKSDPVNCDMQMSDQDPIQEIEIWEPGYSENVEIVASIDEKTRDLE
MITDDKDEHLLKNKEDESGTSNCEQTTLAGDDASDQLPCSLSLQYNNAHEPTFSLSQQDR
VSEEFQKKCEAPGSMKLEDFDMGSSGDDQKTMINPSSDFDAFQPGCVLVEYSRKEAACLA
AHCLHGRLYGDHRVAVEYVAYDLYRARFPR
NT seq 2793 nt   +upstreamnt  +downstreamnt
atgaagatggcagaagttgagcggctaagcggtaaatcgggaattctctatgagctatct
aggaatgaaagaaatgagggtacatcagcccgaacaagacccttaaccatagaagatttg
attttgagaaggaataacaagaaacttctagagacttttggcgaaagaactatagggaaa
acaaaaaaatctgttccagaaactgatgccacttccgatcactctgggtctgacacaatt
cacaaaagggattcatcttcaaaggatgtgaaggggaagcatgatttggatgattctaag
aagaagggcagctccaaaaagaaaaatggtaggcttcctaccaaggaagatgggtattct
aaaggaaaagaggaaaagttgcacagggataagggtagggataccgggggcaagaatgaa
aagcatggtcatcatcggggtaaactggatgaccataatacagggtccaagaaacaccat
tttagtgaagtgggtgtaaaggataggcatgaagagagggataagtacaagaaagagagc
aaaaagaagcataaaagtgaaagtgatgaaaaatataaactagagaaagatggagttgtt
gcaaggaaacaggaacctagcagaagagaagacgatgattatcttgaaggaaacagcagg
aagaaacaatcaaaccaatcctcttatcacgatgaaacgaggccaaaacgtagaaggtca
gagagtcgagaaccaaacagaggtagagaaagaagatctgtttcactttcgccaaggtca
cgtaagcgtacttcttaccgtggttggggccatgatgagtcaacatactattctatcaag
gaaagggttggaaggcatcattccgaaacagaaaggagtagaaaaggaagtaacgggtca
agttcaaatgggcattataggcgccatggtaatgcaagtggtcttggtgggtattctccc
cgaaagagaaggtctgaggcagcagtgagaactccgtctccaatggttcgttcacctgaa
agaaagagtgcagcttgggatctcccacctgttggtctggacacaactggtgtaatttca
aatgtgggttctttgcagtcttcttcatctcgccaagtagttacatctcaaactcacgag
ttgcccaaagttgtctcctttgcatcatctgctctaaattctagcatgttaaattcgacg
aagactggcatattaattgctgaaaacccctttgattctgttcaacttactcaagccact
cgaccgtctagaaggctttatctagagaacattccggcatcggcgtctgatgagtctgtt
gtggaatgcctcaataatttccttctatcatcaggtgctattcgcattaaaggaactcat
ccctgcatcagctgtttgataaacaaagaaaagggtcaagctcttgtggagtttcttaca
cctgaaaatgcaacagcagctcttgcttttgatggcaagtcaatctctggatccatagtc
aaaatcaggcggcctaaggacttcatcgaaacaccagctgttgccactgagaaaccagtg
gctacagtggatgcagtatctgacattgtgaaggattcgccacacaagattttcattggg
ggcattccaaaatctctttcatctgataagcttcaggagattgtcagtgtatttggacat
ttaaaggcctatcattttgaagttaaccgggagagtggcggttcttgtgcatttctagag
tacactgatcagtccattacccttaaagcatgcgctgggctgaatggcatgaaattggga
gggtgtgtattaactgtggtccaggcctttcctgatgtctctgcagaggaaatttcaaaa
ggccctccttcctatgggatacctcagcatgcaaagccactactgaaggaacccacacag
atcctgaagttgaagaatgtgttcaacatggatgatctgtctgagtccgagatcgaagaa
tcattggaagacatacgcattgaatgcacgaggtttggcacagttaagtcggtgaatatc
attcgattaagcaaaagctccgaggaggcccctaacatgaccattaccactggaaacaat
gattcgccaggacccaaacaagatccaactcagataatggagaaattggattctgtaaat
agtgatatactaggagccaaacaagactcgcttcacgaattggagaaatcagaccctgta
aattgtgatatgcaaatgtctgatcaggacccaattcaagaaatagaaatatgggagcct
ggttattctgagaatgttgaaattgttgcttccattgatgagaaaactcgggaccttgag
atgattaccgatgataaagatgaacacttattaaagaataaagaagatgaatctggaaca
tcaaactgtgaacaaacgactctggcaggtgatgatgcttcagaccagcttccatgctct
ctctctctacaatataacaatgcccacgaacctacattctctctttctcaacaagataga
gttagtgaggagtttcagaagaaatgtgaagctcctggttctatgaagttggaagatttt
gatatgggcagtagtggtgatgatcaaaagaccatgataaacccaagttctgattttgat
gcctttcagccgggttgtgttcttgttgagtactctaggaaagaggctgcttgcttggct
gctcactgcttgcatggccggctttatggtgatcacagggttgcagtggagtatgtggct
tatgatctctatcgagccaggttcccgagatga

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