Amborella trichopoda: 18447448
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Entry
18447448 CDS
T02990
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
atr
Amborella trichopoda
Pathway
atr03020
RNA polymerase
atr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
18447448
09124 Replication and repair
03420 Nucleotide excision repair
18447448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18447448
03400 DNA repair and recombination proteins [BR:
atr03400
]
18447448
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
18447448
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
18447448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Tup_N
Motif
Other DBs
NCBI-GeneID:
18447448
NCBI-ProteinID:
XP_011628227
LinkDB
All DBs
Position
Unknown
AA seq
122 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTVGNVLRMQLHRDPNVLFAG
YKLPHPLQYKIIVRIQTTSQSSPMQAYNQAINDLDKELNHLKDIFEDEVARFTRENQVHR
GY
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacctgatcgctatgagcgctttgtagttcctgaaggcaccaagaaggtgtca
tatgagagggacactaagatcatcaatgctgcttcattcaccattgaaagggaggagcac
actgttggcaatgtccttcgcatgcaattgcacagagacccaaatgttcttttcgcaggg
tacaagctgccccatcctctccagtacaagattatcgttcggattcaaaccacaagtcaa
tcttctccaatgcaggcctacaaccaagccatcaatgatcttgataaggagcttaatcac
ctgaaagatatatttgaggatgaggtggctcgatttacaagggagaatcaagttcatagg
ggatattga
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integrated database retrieval system
