KEGG   Amborella trichopoda: 18447541
Entry
18447541          CDS       T02990                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4 isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
atr  Amborella trichopoda
Pathway
atr03020  RNA polymerase
atr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    18447541
  09124 Replication and repair
   03420 Nucleotide excision repair
    18447541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atr03021]
    18447541
   03400 DNA repair and recombination proteins [BR:atr03400]
    18447541
Transcription machinery [BR:atr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     18447541
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      18447541
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 18447541
NCBI-ProteinID: XP_011628249
LinkDB
Position
Unknown
AA seq 203 aa
MADKTGKSSTPISNGGKASSKFKPVAASAKGKATTAKDANVGKENWDKAGKAGKGGSSRE
GKKSAPVVELNIEQELPSDSRCLMDCEAAIMLERIEEQLRTLSNDPAIKIPQSFNLGLKY
AKSCTYYKKPESVKQVRELLGRYQLSDVESCLIANAHPETVEEVYSFVPSFKAKKHVSRG
SISKMLFDLAEIESSQQGSLQDP
NT seq 612 nt   +upstreamnt  +downstreamnt
atggcggataaaacgggaaagtcttctactcctatttcaaatgggggaaaagcttcttcg
aagttcaaaccagttgcagcatcagcaaaagggaaggcaaccacagcaaaagatgcaaat
gtagggaaagaaaattgggacaaggcaggaaaagcgggtaagggcggttcgtcacgagaa
ggaaagaaaagtgcaccagttgtggaactaaacattgagcaagaacttccaagtgactca
agatgtctgatggactgtgaggcagccattatgttagagagaattgaagagcagctgcgg
acattatctaatgatccagcaatcaaaattcctcaatctttcaacctaggtttgaagtat
gcaaagagctgcacctattataagaaacctgagtctgtgaaacaagtccgagaacttctt
ggaagataccagctctcagatgttgagtcatgtttgattgctaatgctcacccagaaaca
gttgaagaagtgtactctttcgtgccatcctttaaggcaaagaaacatgtgagtcgtgga
tcaatcagtaaaatgttgtttgaccttgcagagatagaaagttcccagcagggctccctt
caagatccctga

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