Amborella trichopoda: 18447753
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Entry
18447753 CDS
T02990
Name
(RefSeq) heat stress transcription factor A-7a-like isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18447753
Transcription factors [BR:
atr03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
18447753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
CC_Liprin_beta
Motif
Other DBs
NCBI-GeneID:
18447753
NCBI-ProteinID:
XP_020531402
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MESKPGVKGENQSMPHPLEALQEPAVPPFLVKIYDMVEDHGVDATVSWSQGGNTFVVWDP
NEFSRIILPRYFKHNNFSSFVRQLNTYGFRKVDPDRWEFGNKFFLRGQKNLLKNIHRRKS
SQVHLHPGHAYSTQLGMFGPEGKIERLRQDKNLLMLELIKLRQQQQATNVEIREMNSRLY
AAEQRQQQMMSFLAKAIQSPLFLDQLTKEKERRLITSGRKKRDIPMQSPAGEGSSTIGQI
VKYEPDFYASGFSRSAQDVEPDEITNLELPDDFSSDAYGNAGTDAEEGTHLGKDSTTEHM
YSSVAGHISGGFAYPTFTGPPSSVLCHSHHVPSKGKNVVASDMNVNVGSVDFAGSSSSNE
GSVSGFNYSIEQEEKLQLAFDASDGSPSLNDKFWEKFFSPAGQEYDDTGEETNFMALGSE
RAMSSKQSSIDDLISQMEQLAKDGHRAFDS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaagcctggtgttaaaggcgagaaccagagcatgcctcatccgttggaggct
ctgcaagaacctgctgttcctccttttctagtgaagatctatgacatggtggaggaccat
ggcgttgatgctactgtttcttggagccagggaggcaacacatttgtggtttgggatcca
aatgagttttctaggatcattcttcctcgatatttcaagcacaacaacttctcgagtttt
gttcgccagctcaacacttatggttttcgcaaggttgatcctgaccgatgggaattcggt
aataaattctttcttcgagggcaaaagaatttgcttaagaatattcacaggcgcaagtcc
tcgcaagttcatctccacccaggtcatgcttattctactcagctgggaatgtttgggccc
gaaggtaaaatcgagagacttaggcaagataagaacctgttgatgcttgagctcataaaa
cttcgacagcaacaacaagcgaccaatgttgagatccgtgaaatgaacagtcggttatat
gcagcagagcaaagacaacaacagatgatgtctttccttgctaaagcaatacaaagtccc
ttgttccttgaccagctaaccaaggagaaggaaaggaggctaatcacttcagggagaaag
aaacgcgacattcctatgcaaagtccagctggtgagggatcttcaacaatagggcagatt
gtgaaatatgaaccagatttctatgccagtggtttttctcgttctgcccaggatgtggaa
cctgatgaaatcacaaatcttgaactaccagatgatttctcaagcgatgcatatggcaat
gctggaacagatgcagaggaaggaacacatttggggaaggattcaacaacagagcatatg
tattcatcagtagctggtcatatatcgggaggttttgcttaccctacttttacagggcca
ccgagctctgttttgtgtcattcacatcatgtcccttcaaaggggaagaatgttgtggct
tctgatatgaatgtcaatgtaggttctgttgattttgctggttcttcctcctcgaatgag
ggttcagtctcgggatttaattactctattgaacaggaggagaaattgcagcttgctttt
gatgcaagtgacggttcccccagtctcaatgacaaattttgggagaaattttttagtcct
gcaggtcaagaatatgatgatacaggggaggaaacaaactttatggcacttgggtccgaa
agagctatgtcaagcaaacagtcatctattgatgacctcatctctcagatggagcagctt
gcaaaagatgggcatagagcctttgattcttga
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