Amborella trichopoda: 18447768
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Entry
18447768 CDS
T02990
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18447768
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
18447768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
18447768
NCBI-ProteinID:
XP_006857917
UniProt:
U5DA49
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MGLGGGFWEFVKPIARYENLDFLRDKKVAVDLSYWIVQHQTALKGNARNPHLRVTFFRTI
NLFSKVGAYPVFVLDGNPSPLKAQARAERFFRMSGIDISGFSHSENETIARNPVFNRSVQ
ECVELLELLGMPILKAECEAEALCAQLDSEGRVDACITADSDAFLYGAKCVIKSLQYNFK
ERCVECYQAADIESRLGLKRKQMIVIALLVGNDYDMRGVPGIGFTTAARFVQLFHDDEIL
DRLRDLGTGNASCLLDNTKLFEDLGESNSAVSPTKKRVSHCSNCGHPGTKGIHMRLACDY
CIHNGLEGCQPKPQNFTCECSHCIEERKSKDQKKCMSWREKICTKIATVGNFPNEEIIEM
FLCQNHGIFNGIDGSTLSWKAPETELLVDFLEYHQHWSPSLIRQGMLPLLSTIFLREMAS
RHTEGLLLCDKYEFHSIQREKARYGHPFYVVKWKRAGSFPINLEDFGPKNARIVHEQDEN
IDGGDLIDLLDDNPDDHQIITFNGCEFLSTDEDVGLVQAAFPEIVEIFLKGKETKKEKSM
KNKTGKETGDTQRSITEFFRVTKPLISPKSGEDPMKGDIEENSRAITTKNSKKYKRNSGE
GVSEENSGGTTPKNSKKYKRNSGAISETRSSEDRTFSKSVRRRLLLG
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgggacttggaggtggtttctgggaatttgtgaagcccattgcgagatacgagaacttg
gattttctcagagacaagaaagttgcagtggacctctcttattggattgttcagcaccaa
actgctttgaaggggaatgccaggaatccccatttgagggtcacgtttttcagaaccatt
aatctcttctccaaggttggggcctatccagtttttgttttggatggaaacccttcacca
ttgaaggcgcaagcaagggccgagaggtttttcagaatgtcaggcatcgacatttcaggt
ttttcacactctgaaaatgagaccattgcgagaaatccagttttcaacagaagtgttcaa
gaatgtgtggaactgcttgagctgttggggatgcctattttgaaagcagaatgtgaggct
gaagcactctgtgctcagttggatagtgaaggccgtgtggatgcttgtataacagctgac
agtgatgcctttctttatggagcaaagtgtgtgataaaatctctccaatacaattttaaa
gaacgttgtgttgagtgctaccaagcagcagacatagaaagtcgtcttggattgaagagg
aaacaaatgatagtcatagcattgctagttgggaatgactatgacatgcgaggagttcca
gggatagggtttactactgcagctcgctttgtccagttgttccatgatgatgagatttta
gatcggttacgtgatctaggaacagggaatgcgtcatgccttttggacaataccaagtta
ttcgaagacttaggggagtctaattcagctgttagcccaaccaagaaaagagtttctcat
tgttcaaattgtggacaccctggtactaaaggtattcatatgaggcttgcctgtgactat
tgcattcacaatggtcttgaaggctgccaaccaaagcctcagaactttacctgtgaatgc
agtcactgcattgaggaaagaaagagcaaggatcagaagaaatgcatgagttggagagaa
aaaatttgtacaaagatagcaacagttgggaacttcccaaatgaagaaatcatagaaatg
tttctctgtcagaaccatgggattttcaatgggatcgatggatctactctttcatggaaa
gcaccagaaactgagcttttagtggacttcttagaatatcatcagcactggagtccttca
cttattcgccaaggaatgcttccacttctctctaccatatttcttcgagagatggcttct
aggcatacagagggtctactactttgtgacaagtatgaatttcattcgattcagagagag
aaagcaagatatggccatccattttacgtggtgaagtggaaaagggcaggttcatttcca
atcaatcttgaggattttgggccaaaaaatgcgcggattgttcatgaacaagatgaaaat
atagacggtggagatcttatcgatctgctggatgacaatcccgacgatcatcagatcata
acatttaatggatgtgagtttctttccactgatgaggacgtggggctggtgcaggctgcc
tttcctgaaatagtcgagatattccttaaaggaaaggaaacaaagaaagagaaatccatg
aaaaacaagacaggaaaggaaacaggtgacacccagaggagcatcaccgaattcttcaga
gtgaccaagccattgatatctccaaaaagtggtgaggaccccatgaagggagatattgag
gagaattccagagctataacgactaaaaattcaaagaaatacaagagaaattctggggag
ggagtcagtgaggagaattccggaggtacaacgcctaaaaattcaaagaaatacaagaga
aattctggggcaatatcagaaacaagaagttcagaggaccggaccttctcaaagtcggtt
agaagacgcctgcttttaggttag
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