Amborella trichopoda: 18447859
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Entry
18447859 CDS
T02990
Name
(RefSeq) ABC transporter G family member 39 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
atr
Amborella trichopoda
Pathway
atr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
18447859
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atr02000
]
18447859
Transporters [BR:
atr02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
18447859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
AAA_16
ABC_trans_N
AAA_22
ABC_ATPase
AAA_18
AAA
AAA_28
AAA_33
AAA_30
ABC2_membrane_3
RsgA_GTPase
nSTAND3
T2SSE
NTPase_1
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
18447859
NCBI-ProteinID:
XP_011628423
LinkDB
All DBs
Position
Unknown
AA seq
1382 aa
AA seq
DB search
MHHQEGWKASSDILKPSDSSEEEGDAMECVDVSHQLYHEERLVHGMLRTDNGWFLREMRR
RIDRVGINIPKIEVRFERLCVEADAHIGRRALPTLVNATINTLEDMLGFIGLSPSNKAKL
NILKRVNGIVKPSRMTLVLGPPSSGKTTLLQALAGKLDPNLRVRGKVTYNGKDLRDFEPL
RTCSYVGQHDLHNGRMTVRETLDFSCRLLGNETQSEMLAEICRREKALGITPHPEIDTFM
KANLEEDKGRSLVIDHILKVLGLENCADTIVGDQMQRGISGGQKKRLTIGEMLVGSARVF
FMDEISTGLDSLTIFQIVEYLHQFVHTMDVTMVISMIQPTPETFQLFDEVILMNEGQIAY
QGPREKILDFFKFMGFSCPSRKNIADFLQEVMSKMDQEQYWADMTRPYKYVPIKTFARAF
QSFHVGQLLNQELHIPCDLSKACPFALASEKYGLSRWQLFVACFWREWLLMKRNSFLHIF
KMVQISIMALIVMTVFLRTGTKQGSITDGNRYLGALYSGVVVVTFNGMTELTMTILRLPV
FYKQRDLQLYPGWAFLLPIFVLHLPMSFFESGMWVCSTYYVIGFAPSVTRFLRQFLVLFC
MHQMSMGLFRLIAAVGRTAVVANSFAIAILIAINILGGFIISKDDIPSWWVWGYWVSPMT
YSQNGVALNEFLDKRWSLPNIDVASNAGTVGKAFLKSRGMFSEEYWFWICIGAVAGFSLL
FNVLCILALGYLSAPRKHQACGPVQSDKNEEHPFYSMGADHPVTTLAVPERGMVLPFQPF
SLAFNHISYYINMPAEMKEVVSEKRLRLLKDVSGAFRPQILTAVMGVSGAGKTTLMDVLA
GRKTGGYIEGNVSVSGYPKNQETFARISGYCEQIDIHSPFVTVYESLLFSAWLRLPRHIE
PSTRKMFVEEVMDLVELKALRNSLVGVPGLSGLSTEQRKRLTIAVELVANPSIIFMDEPT
SGLDARAAAIVMRVVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKKGGQLIYEGPLGH
FSQNLIQYFEAIPGIPKIKDGYNPAAWMLDITSSAMETDLAVDFAQVYCNSCLYKENQQL
IEELSRPSTVSKDLSFESLPSQNFLTQCMVCLWKQHWSYWRNPQYNAIRFLITITISVLF
ATIFWGIALDLSKQQDFFNALGAIYSLAFFLGFTNTTAVQPIVGLERMVLYREKSAGMYS
AMPYAIAQVVIEIPYIVIQVLLFVLIVYPMIGFSWMGAKFLWFTLFMLLSIIYFTLFGMM
TVALTPTQELAGILSFLVFILWNIFSGFYIARPMIPLWWRWFYWVNPAAWTIYGLMVSQL
GDCTETINLPGQASKSVKDVLEDYFGIEAYFLSTAVAVHIVFIFLFLFVFCLCTKYLNFQ
RR
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatcaagagggatggaaagcaagtagtgacattcttaagccttctgattcctct
gaggaagaaggggatgccatggagtgtgtcgatgtgtcccaccaactttaccatgaggag
cggctagtgcacgggatgctaaggaccgacaatggatggtttcttcgcgaaatgaggaga
aggatcgacagggttggaatcaatattcctaaaattgaggtccgctttgagcgattatgt
gtggaggctgatgcacacattggaagaagggctcttcccacactagtgaatgccacaatc
aatactttggaggacatgctaggcttcataggcctctcaccctcaaataaagcaaaattg
aatattctcaaacgggtgaatggcattgtaaagccctcaaggatgactctggttcttggg
cctccaagctctggtaaaacaacattgttgcaagcccttgccggaaaacttgatcctaat
ttaagggttcgtggtaaagtgacatataatggcaaagacttgagggatttcgaaccgtta
aggacttgctcttatgtaggtcaacacgatcttcacaatgggcgaatgacagtgagagag
acattggatttttcatgccgtttattaggcaatgagacccaatcagagatgctagctgag
atatgcaggagagagaaggctctaggtattacaccacacccagagattgacacatttatg
aaggctaacttggaggaagacaaaggaagatcccttgtgattgatcatattcttaaggtc
ctaggattggaaaattgtgctgatacgatagtgggtgatcaaatgcaaagagggatttct
ggtggccaaaagaaaagacttacaatcggggagatgttggttgggtcagcaagagtgttc
ttcatggacgagatatctacaggtttagatagtttgaccatttttcagattgtggagtac
ttacatcagttcgttcacacgatggatgtaaccatggttatatcaatgatacaacctacc
cctgagaccttccaactctttgatgaagttatcctcatgaatgaaggtcaaattgcttac
caaggccctcgtgaaaagattttagatttcttcaagttcatgggattcagttgtcccagt
agaaagaacattgcagactttctccaagaggtgatgtctaagatggatcaagaacaatat
tgggctgacatgactcgcccctataaatatgttcctataaagacatttgcgagggccttc
cagtcctttcatgtgggccagcttttaaaccaggaattgcatattccctgtgacttgtca
aaagcctgcccttttgccctagcctccgagaagtatggcctttccaggtggcagctcttc
gttgcatgcttttggagggaatggttactaatgaaaagaaactcctttctgcacatcttc
aagatggtccaaatctccatcatggccttaatagttatgactgtattcttgaggactgga
acgaaacaaggttccattactgacggcaacagatatcttggggcattatattctggagtg
gtggttgttacattcaatggcatgacagagcttaccatgaccatcttacgtttgccagta
ttttacaagcaaagggacctgcaactctatccaggatgggccttcttgctgcctatcttt
gtgcttcacttgcctatgtcattctttgaatctgggatgtgggtttgctcaacatattat
gtgattggctttgccccatctgttactaggtttcttcgacaatttcttgtactcttttgt
atgcaccaaatgtcaatgggactcttccgtctcatagctgcggttggaaggacagcagtt
gttgccaactcatttgcaattgctatcctcattgcaattaacatccttggtggttttatt
atatctaaagatgatattccttcatggtgggtctggggttattgggtctctcctatgaca
tattcccagaatggtgttgcccttaatgaattcttggacaagagatggagcctgccaaac
attgatgtggccagcaatgcaggcacggtggggaaggccttccttaaatcaaggggaatg
ttttccgaggaatattggttctggatatgcataggagctgtagctggcttttctttgctc
tttaatgttttatgtatcctagccttgggatatcttagtgctccccgaaagcaccaggct
tgtggcccagttcaatctgataaaaatgaggaacacccattttatagcatgggtgctgat
catccagtaacaactttggcagttcctgagagaggcatggtgctacctttccagcccttc
tcccttgcattcaaccacataagttactacatcaacatgcctgctgagatgaaggaagtg
gtttcggagaaacgattacgactgctcaaggatgtgagtggagctttcagaccacaaatt
ttaacagcagtaatgggggtctctggcgcaggcaaaaccacattgatggatgtactggct
ggaagaaaaactgggggttatatagaaggaaatgttagtgtttctgggtacccaaaaaac
caggaaacctttgctagaatttctggttattgtgaacaaattgacatccattcaccattt
gttacagtctatgagtccctgctcttctctgcatggcttcgtctcccccgacatattgag
ccctctactaggaaaatgtttgtggaggaggtaatggatctcgtggaactgaaagcatta
aggaactcattggttggtgtccctgggctttctggcctatccactgagcagagaaagagg
ctgactattgctgttgagttggtggcaaacccttcgatcatattcatggacgagcccaca
tctgggcttgatgcaagggcagctgccattgtcatgagggtggtgaggaacactgttgac
acaggtcgcaccgtggtctgcaccatacaccagccgagtattgatatctttgaagctttt
gatgagctactactaatgaaaaaaggtgggcagctcatatatgaaggaccactgggtcat
ttctctcagaacctgattcagtacttcgaggctattccagggattcctaaaataaaggat
ggttataatccagcagcttggatgttggacattacttcttctgccatggagactgatctc
gctgtagattttgctcaagtttattgcaactcctgtttatacaaggaaaaccagcaactc
atagaggaattgagtaggccttcaacagtttcaaaagaccttagcttcgaatccttgccc
tctcagaacttcttgactcagtgtatggtatgcttgtggaaacagcattggtcctattgg
aggaatccccaatacaatgccatccgtttcctcatcacaatcacaatatcggttctcttt
gcaaccatattctggggcattgctttggacctgagcaagcagcaagatttttttaacgct
cttggtgcaatctattctttagcattcttcttgggcttcacgaacacaactgcagttcaa
cccattgtaggcctagagagaatggttttatatcgtgagaaatcagccggaatgtattcg
gccatgccttatgccattgctcaggtggtcattgagatcccatatattgtgatccaagta
ctactctttgtcttaatcgtatacccgatgatcggtttttcttggatgggggcaaagttc
ttgtggttcactttgtttatgttactaagtatcatctacttcactctctttgggatgatg
acagtagctttaactccaacccaagagttggctggcattctctctttcttagtgtttatc
ttatggaacattttctctggtttctacattgctagaccaatgattcctctttggtggaga
tggttttattgggttaatcctgcggcttggactatttatggtttgatggtttctcagttg
ggagattgtactgagacaatcaatctacctggccaagcaagcaagagtgtcaaagacgtt
cttgaagattattttggaattgaagcctactttctaagtactgccgttgcagttcacatt
gtgtttatttttcttttcttgtttgttttttgtttgtgtaccaaatatttgaatttccaa
aggaggtga
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